dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: MGYG000001885_01640

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Basic Information help

Species

Lineage

Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Muribaculaceae; UBA7173;

CAZyme ID

MGYG000001885_01640

CAZy Family

GH2

CAZyme Description

Beta-galactosidase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
458		52030.71	4.5029

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001885	2138069	MAG	Denmark	Europe

Gene Location

Start: 658; End: 2034 Strand: -

Full Sequence Download help

Enzyme Prediction help

No EC number prediction in MGYG000001885_01640.

CAZyme Signature Domains help

Family	Start	End	Evalue	family coverage
GH2	3	350	4.3e-63	0.39095744680851063

CDD Domains download full data without filtering help

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG3250	LacZ	1.51e-26	32	265	214	430	Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
pfam00703	Glyco_hydro_2	4.58e-15	4	99	1	106	Glycosyl hydrolases family 2. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.
PRK10150	PRK10150	1.12e-13	4	265	182	449	beta-D-glucuronidase; Provisional
PRK09525	lacZ	1.14e-12	3	270	220	491	beta-galactosidase.
PRK10340	ebgA	1.56e-11	2	264	207	472	cryptic beta-D-galactosidase subunit alpha; Reviewed

CAZyme Hits help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QPH58832.1	3.57e-134	5	404	214	599
BBK86513.1	4.40e-134	5	404	164	549
QMI79934.1	7.13e-134	5	404	214	599
QJR75691.1	3.91e-133	3	404	212	599
AND19844.1	3.91e-133	3	404	212	599

PDB Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
7SF2_A	6.50e-123	5	404	197	582	ChainA, Glycosyl hydrolase family 2, sugar binding domain protein [Bacteroides cellulosilyticus DSM 14838],7SF2_B Chain B, Glycosyl hydrolase family 2, sugar binding domain protein [Bacteroides cellulosilyticus DSM 14838],7SF2_C Chain C, Glycosyl hydrolase family 2, sugar binding domain protein [Bacteroides cellulosilyticus DSM 14838],7SF2_D Chain D, Glycosyl hydrolase family 2, sugar binding domain protein [Bacteroides cellulosilyticus DSM 14838],7SF2_E Chain E, Glycosyl hydrolase family 2, sugar binding domain protein [Bacteroides cellulosilyticus DSM 14838],7SF2_F Chain F, Glycosyl hydrolase family 2, sugar binding domain protein [Bacteroides cellulosilyticus DSM 14838]
3DYM_A	2.06e-12	58	317	291	548	ChainA, Beta-galactosidase [Escherichia coli K-12],3DYM_B Chain B, Beta-galactosidase [Escherichia coli K-12],3DYM_C Chain C, Beta-galactosidase [Escherichia coli K-12],3DYM_D Chain D, Beta-galactosidase [Escherichia coli K-12],3E1F_1 Chain 1, Beta-galactosidase [Escherichia coli K-12],3E1F_2 Chain 2, Beta-galactosidase [Escherichia coli K-12],3E1F_3 Chain 3, Beta-galactosidase [Escherichia coli K-12],3E1F_4 Chain 4, Beta-galactosidase [Escherichia coli K-12]
3IAP_A	3.61e-12	58	317	291	548	ChainA, Beta-galactosidase [Escherichia coli K-12],3IAP_B Chain B, Beta-galactosidase [Escherichia coli K-12],3IAP_C Chain C, Beta-galactosidase [Escherichia coli K-12],3IAP_D Chain D, Beta-galactosidase [Escherichia coli K-12]
3J7H_A	4.78e-12	58	317	292	549	Structureof beta-galactosidase at 3.2-A resolution obtained by cryo-electron microscopy [Escherichia coli K-12],3J7H_B Structure of beta-galactosidase at 3.2-A resolution obtained by cryo-electron microscopy [Escherichia coli K-12],3J7H_C Structure of beta-galactosidase at 3.2-A resolution obtained by cryo-electron microscopy [Escherichia coli K-12],3J7H_D Structure of beta-galactosidase at 3.2-A resolution obtained by cryo-electron microscopy [Escherichia coli K-12],4CKD_A Model of complex between the E.coli enzyme beta-galactosidase and four single chain Fv antibody domains scFv13R4. [Escherichia coli K-12],4CKD_B Model of complex between the E.coli enzyme beta-galactosidase and four single chain Fv antibody domains scFv13R4. [Escherichia coli K-12],4CKD_C Model of complex between the E.coli enzyme beta-galactosidase and four single chain Fv antibody domains scFv13R4. [Escherichia coli K-12],4CKD_D Model of complex between the E.coli enzyme beta-galactosidase and four single chain Fv antibody domains scFv13R4. [Escherichia coli K-12],6DRV_A Beta-galactosidase [Escherichia coli K-12],6DRV_B Beta-galactosidase [Escherichia coli K-12],6DRV_C Beta-galactosidase [Escherichia coli K-12],6DRV_D Beta-galactosidase [Escherichia coli K-12]
3MUY_1	4.78e-12	58	317	291	548	Chain1, Beta-D-galactosidase [Escherichia coli K-12],3MUY_2 Chain 2, Beta-D-galactosidase [Escherichia coli K-12],3MUY_3 Chain 3, Beta-D-galactosidase [Escherichia coli K-12],3MUY_4 Chain 4, Beta-D-galactosidase [Escherichia coli K-12]

Swiss-Prot Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
T2KM09	1.11e-19	38	364	243	539	Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22050 PE=2 SV=2
Q03WL0	1.09e-17	58	322	287	549	Beta-galactosidase OS=Leuconostoc mesenteroides subsp. mesenteroides (strain ATCC 8293 / DSM 20343 / BCRC 11652 / CCM 1803 / JCM 6124 / NCDO 523 / NBRC 100496 / NCIMB 8023 / NCTC 12954 / NRRL B-1118 / 37Y) OX=203120 GN=lacZ PE=3 SV=1
Q48727	1.89e-17	59	317	262	519	Beta-galactosidase OS=Lactococcus lactis subsp. lactis (strain IL1403) OX=272623 GN=lacZ PE=3 SV=3
A5F5U6	7.48e-15	56	317	287	545	Beta-galactosidase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395) OX=345073 GN=lacZ PE=3 SV=2
A7MN76	5.44e-14	13	318	244	558	Beta-galactosidase OS=Cronobacter sakazakii (strain ATCC BAA-894) OX=290339 GN=lacZ PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000073	0.000003	0.000000	0.000000	0.000000	0.000000

TMHMM Annotations help

There is no transmembrane helices in MGYG000001885_01640.