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CAZyme Information: MGYG000001887_01357

You are here: Home > Sequence: MGYG000001887_01357

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Ruminiclostridium_E sp003512525
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Ruminiclostridium_E; Ruminiclostridium_E sp003512525
CAZyme ID MGYG000001887_01357
CAZy Family GH27
CAZyme Description Alpha-galactosidase A
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
396 MGYG000001887_16|CGC1 45036.68 4.9764
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001887 2739679 MAG Denmark Europe
Gene Location Start: 37870;  End: 39060  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001887_01357.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH27 105 370 2.6e-71 0.982532751091703

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd14792 GH27 2.92e-141 9 298 1 271
glycosyl hydrolase family 27 (GH27). GH27 enzymes occur in eukaryotes, prokaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-N-acetylgalactosaminidase, and 3-alpha-isomalto-dextranase. All GH27 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. GH27 members are retaining enzymes that cleave their substrates via an acid/base-catalyzed, double-displacement mechanism involving a covalent glycosyl-enzyme intermediate. Two aspartic acid residues have been identified as the catalytic nucleophile and the acid/base, respectively.
PLN02808 PLN02808 2.74e-115 5 390 28 382
alpha-galactosidase
PLN02229 PLN02229 2.20e-107 5 389 59 415
alpha-galactosidase
PLN02692 PLN02692 2.28e-103 5 392 52 409
alpha-galactosidase
pfam16499 Melibiase_2 2.78e-92 8 298 1 284
Alpha galactosidase A.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
CBL33680.1 3.83e-317 1 396 1 396
CBK97479.1 6.26e-316 1 396 1 396
ADU22068.1 9.68e-212 1 396 1 385
APC40140.1 1.48e-204 1 395 1 387
QAA34453.1 2.73e-204 4 395 1 374

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1UAS_A 1.94e-96 2 389 2 357
ChainA, alpha-galactosidase [Oryza sativa]
6F4C_B 9.05e-95 5 389 5 358
Nicotianabenthamiana alpha-galactosidase [Nicotiana benthamiana]
4NZJ_A 2.53e-84 2 389 94 471
Crystalstructure of a putative alpha-galactosidase (BF1418) from Bacteroides fragilis NCTC 9343 at 1.57 A resolution [Bacteroides fragilis NCTC 9343]
4OGZ_A 3.55e-83 2 392 94 473
Crystalstructure of a putative alpha-galactosidase/melibiase (BF4189) from Bacteroides fragilis NCTC 9343 at 2.00 A resolution [Bacteroides fragilis NCTC 9343],4OGZ_B Crystal structure of a putative alpha-galactosidase/melibiase (BF4189) from Bacteroides fragilis NCTC 9343 at 2.00 A resolution [Bacteroides fragilis NCTC 9343]
3A5V_A 7.29e-82 5 384 5 383
Crystalstructure of alpha-galactosidase I from Mortierella vinacea [Umbelopsis vinacea]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P14749 1.68e-98 2 389 49 405
Alpha-galactosidase OS=Cyamopsis tetragonoloba OX=3832 PE=1 SV=1
Q8VXZ7 4.70e-96 5 389 69 425
Alpha-galactosidase 3 OS=Arabidopsis thaliana OX=3702 GN=AGAL3 PE=1 SV=1
Q9FXT4 5.80e-95 2 389 57 412
Alpha-galactosidase OS=Oryza sativa subsp. japonica OX=39947 GN=Os10g0493600 PE=1 SV=1
Q8RX86 8.64e-95 1 390 32 390
Alpha-galactosidase 2 OS=Arabidopsis thaliana OX=3702 GN=AGAL2 PE=1 SV=1
Q42656 6.32e-93 5 389 20 373
Alpha-galactosidase OS=Coffea arabica OX=13443 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000057 0.000026 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001887_01357.