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CAZyme Information: MGYG000001888_00006

You are here: Home > Sequence: MGYG000001888_00006

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia_A; Christensenellales; Borkfalkiaceae; UMGS775;
CAZyme ID MGYG000001888_00006
CAZy Family GH163
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
570 MGYG000001888_1|CGC1 66085.13 5.955
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001888 1136142 MAG Denmark Europe
Gene Location Start: 8038;  End: 9750  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001888_00006.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH163 185 446 3.1e-90 0.9960159362549801

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam16126 DUF4838 1.01e-102 179 446 2 263
Domain of unknown function (DUF4838). This family consists of several uncharacterized proteins found in various Bacteroides and Chloroflexus species. The function of this family is unknown.
pfam03648 Glyco_hydro_67N 8.70e-06 8 99 24 118
Glycosyl hydrolase family 67 N-terminus. Alpha-glucuronidases, components of an ensemble of enzymes central to the recycling of photosynthetic biomass, remove the alpha-1,2 linked 4-O-methyl glucuronic acid from xylans. This family represents the N-terminal region of alpha-glucuronidase. The N-terminal domain forms a two-layer sandwich, each layer being formed by a beta sheet of five strands. A further two helices form part of the interface with the central, catalytic, module (pfam07488).
COG3661 AguA2 5.80e-05 16 130 39 159
Alpha-glucuronidase [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AIF26900.1 9.36e-145 8 551 16 582
ASV73444.1 1.66e-104 6 547 36 598
QOY90686.1 5.37e-101 6 511 27 532
AXE18406.1 2.06e-100 6 508 310 807
QMU27529.1 4.41e-99 6 506 58 548

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000056 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001888_00006.