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CAZyme Information: MGYG000001896_01399

You are here: Home > Sequence: MGYG000001896_01399

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UMGS1840 sp900555525
Lineage Bacteria; Firmicutes_A; Clostridia; UMGS1840; UMGS1840; UMGS1840; UMGS1840 sp900555525
CAZyme ID MGYG000001896_01399
CAZy Family SLH
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
780 MGYG000001896_104|CGC1 84011.48 4.5361
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001896 2208881 MAG Denmark Europe
Gene Location Start: 275;  End: 2617  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001896_01399.

CAZyme Signature Domains help

Family Start End Evalue family coverage
SLH 626 667 2.9e-18 0.9761904761904762

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00395 SLH 1.28e-13 626 667 1 42
S-layer homology domain.
pfam13290 CHB_HEX_C_1 1.40e-12 496 568 2 67
Chitobiase/beta-hexosaminidase C-terminal domain.
pfam13287 Fn3_assoc 8.87e-12 506 571 1 59
Fn3 associated.
NF033190 inl_like_NEAT_1 2.42e-11 599 725 618 743
NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading.
NF033190 inl_like_NEAT_1 5.86e-11 626 744 582 705
NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QKS46422.1 9.13e-28 584 776 1125 1305
QUL56471.1 3.36e-26 578 775 1114 1299
QOS78172.1 7.74e-26 583 772 1129 1306
QLG41554.1 1.76e-25 583 772 1117 1294
QSF47646.1 3.03e-25 581 775 1090 1273

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6BT4_A 5.02e-12 585 730 48 192
Crystalstructure of the SLH domain of Sap from Bacillus anthracis in complex with a pyruvylated SCWP unit [Bacillus anthracis]
3PYW_A 5.11e-12 585 730 27 171
Thestructure of the SLH domain from B. anthracis surface array protein at 1.8A [Bacillus anthracis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q06852 1.02e-28 579 775 2098 2296
Cell surface glycoprotein 1 OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=olpB PE=3 SV=2
Q06853 1.70e-27 575 775 474 670
Cell surface glycoprotein 2 OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=Cthe_3079 PE=1 SV=1
Q06848 5.64e-24 579 771 237 426
Cellulosome-anchoring protein OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=ancA PE=1 SV=1
P38536 1.67e-13 458 737 1574 1858
Amylopullulanase OS=Thermoanaerobacterium thermosulfurigenes OX=33950 GN=amyB PE=3 SV=2
P38537 7.58e-13 585 761 56 228
Surface-layer 125 kDa protein OS=Lysinibacillus sphaericus OX=1421 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000582 0.816711 0.181911 0.000282 0.000274 0.000216

TMHMM  Annotations      download full data without filtering help

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