logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000001902_01409

You are here: Home > Sequence: MGYG000001902_01409

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; UMGS1810; UMGS1810; UMGS1810;
CAZyme ID MGYG000001902_01409
CAZy Family GH78
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
331 MGYG000001902_64|CGC1 38085.21 4.7165
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001902 1713632 MAG Denmark Europe
Gene Location Start: 5251;  End: 6246  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001902_01409.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH78 20 324 1.2e-28 0.5793650793650794

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17389 Bac_rhamnosid6H 2.56e-08 19 324 37 336
Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BCG54172.1 3.67e-111 22 320 366 662
AJY74261.1 2.54e-107 22 328 421 724
QHI69947.1 2.08e-103 22 331 393 700
BBD46135.1 2.39e-100 22 320 449 744
QGY42778.1 2.49e-99 22 320 439 735

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.981829 0.017905 0.000143 0.000054 0.000036 0.000065

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001902_01409.