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CAZyme Information: MGYG000001906_00066

You are here: Home > Sequence: MGYG000001906_00066

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Cyanobacteria; Vampirovibrionia; Gastranaerophilales; Gastranaerophilaceae; CAG-484;
CAZyme ID MGYG000001906_00066
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
499 MGYG000001906_1|CGC1 56109.11 9.751
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001906 2224684 MAG Denmark Europe
Gene Location Start: 68847;  End: 70346  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001906_00066.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 91 273 1.8e-57 0.994535519125683

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 5.59e-05 40 370 30 341
Pectate lyase [Carbohydrate transport and metabolism].
pfam18884 TSP3_bac 2.03e-04 423 444 1 22
Bacterial TSP3 repeat. This entry contains a novel bacterial thrombospondin type 3 repeat which differs from the typical consensus by containing a glutamate in place of one of the calcium binding aspartate residues.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AXP82553.1 3.12e-118 40 475 123 559
AWK06249.1 4.36e-113 34 478 40 495
QNL41084.1 4.27e-112 36 475 54 525
AXP81339.1 2.63e-111 40 482 578 1021
QRQ55767.1 1.01e-110 36 475 54 527

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6FI2_A 1.03e-07 45 254 46 252
VexL:A periplasmic depolymerase provides new insight into ABC transporter-dependent secretion of bacterial capsular polysaccharides [Achromobacter denitrificans]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B8NQQ7 6.70e-45 40 468 22 414
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q4WL88 9.50e-45 40 468 23 415
Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1
B0XMA2 1.32e-44 40 468 23 415
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1
Q2UB83 2.46e-43 40 468 22 414
Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1
A1DPF0 6.68e-43 40 468 23 415
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.977429 0.021356 0.000157 0.000173 0.000087 0.000832

TMHMM  Annotations      download full data without filtering help

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