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CAZyme Information: MGYG000001908_01866

You are here: Home > Sequence: MGYG000001908_01866

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Ruminococcus_D sp900543145
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Ruminococcus_D; Ruminococcus_D sp900543145
CAZyme ID MGYG000001908_01866
CAZy Family GH59
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
904 99912.93 4.5861
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001908 2355088 MAG Denmark Europe
Gene Location Start: 3666;  End: 6380  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001908_01866.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH59 50 714 1.9e-193 0.9873217115689382

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam02057 Glyco_hydro_59 1.88e-123 53 371 1 293
Glycosyl hydrolase family 59.
COG5520 XynC 3.70e-05 6 309 4 306
O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
CCO04392.1 0.0 35 839 41 839
CBL34686.1 0.0 33 843 16 809
CBK96504.1 0.0 33 843 16 809
CBL16905.1 0.0 54 838 4 780
BCN31742.1 1.37e-307 38 845 8 826

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4CCC_A 2.03e-43 32 636 8 576
StructureOf Mouse Galactocerebrosidase With 4nbdg: Enzyme-substrate Complex [Mus musculus],4CCD_A Structure Of Mouse Galactocerebrosidase With D-galactal: Enzyme-intermediate Complex [Mus musculus],4CCE_A Structure Of Mouse Galactocerebrosidase With Galactose: Enzyme-product Complex [Mus musculus],4UFH_A Mouse Galactocerebrosidase complexed with iso-galacto-fagomine IGF [Mus musculus],4UFI_A Mouse Galactocerebrosidase complexed with aza-galacto-fagomine AGF [Mus musculus],4UFJ_A Mouse Galactocerebrosidase complexed with iso-galacto-fagomine lactam IGL [Mus musculus],4UFK_A Mouse Galactocerebrosidase complexed with dideoxy-imino-lyxitol DIL [Mus musculus],4UFL_A Mouse Galactocerebrosidase complexed with deoxy-galacto-noeurostegine DGN [Mus musculus],4UFM_A Mouse Galactocerebrosidase complexed with 1-deoxy-galacto-nojirimycin DGJ [Mus musculus],5NXB_A Mouse galactocerebrosidase in complex with saposin A [Mus musculus],5NXB_B Mouse galactocerebrosidase in complex with saposin A [Mus musculus],6Y6S_A Chain A, Galactocerebrosidase [Mus musculus],6Y6T_A Chain A, Galactocerebrosidase [Mus musculus]
3ZR5_A 2.78e-43 40 636 11 578
STRUCTUREOF GALACTOCEREBROSIDASE FROM MOUSE [Mus musculus],3ZR6_A STRUCTURE OF GALACTOCEREBROSIDASE FROM MOUSE IN COMPLEX WITH GALACTOSE [Mus musculus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P54818 2.05e-42 53 636 55 606
Galactocerebrosidase OS=Mus musculus OX=10090 GN=Galc PE=1 SV=2
P54803 8.93e-42 53 715 55 682
Galactocerebrosidase OS=Homo sapiens OX=9606 GN=GALC PE=1 SV=3
O02791 1.60e-41 53 636 55 607
Galactocerebrosidase OS=Macaca mulatta OX=9544 GN=GALC PE=1 SV=2
P54804 7.91e-41 53 636 39 591
Galactocerebrosidase OS=Canis lupus familiaris OX=9615 GN=GALC PE=1 SV=1
Q0VA39 9.16e-38 51 601 45 563
Galactocerebrosidase OS=Xenopus tropicalis OX=8364 GN=galc PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000323 0.998946 0.000172 0.000198 0.000186 0.000154

TMHMM  Annotations      download full data without filtering help

start end
7 26
873 895