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CAZyme Information: MGYG000001909_00284

You are here: Home > Sequence: MGYG000001909_00284

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species QAKW01 sp003343605
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; QAKW01; QAKW01; QAKW01 sp003343605
CAZyme ID MGYG000001909_00284
CAZy Family CBM67
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
683 78011.47 4.8503
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001909 1743116 MAG Denmark Europe
Gene Location Start: 17477;  End: 19528  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001909_00284.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH78 238 680 1.6e-54 0.8571428571428571
CBM67 6 135 1.7e-16 0.7727272727272727

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17389 Bac_rhamnosid6H 8.04e-18 344 680 10 339
Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AUS95627.1 6.42e-183 6 681 11 708
QNK57365.1 9.44e-143 4 680 5 712
QGQ97405.1 2.79e-142 3 680 6 713
ARN56684.1 8.03e-106 3 678 20 709
AVM43288.1 1.07e-91 1 678 1 651

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2OKX_A 3.32e-35 195 673 398 868
Crystalstructure of GH78 family rhamnosidase of Bacillus SP. GL1 AT 1.9 A [Bacillus sp. GL1],2OKX_B Crystal structure of GH78 family rhamnosidase of Bacillus SP. GL1 AT 1.9 A [Bacillus sp. GL1]
4XHC_A 3.64e-19 341 681 210 542
ChainA, Alpha-L-rhamnosidase [Klebsiella oxytoca],4XHC_B Chain B, Alpha-L-rhamnosidase [Klebsiella oxytoca]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000057 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001909_00284.