Species | Duncaniella dubosii | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Muribaculaceae; Duncaniella; Duncaniella dubosii | |||||||||||
CAZyme ID | MGYG000001910_00273 | |||||||||||
CAZy Family | GH28 | |||||||||||
CAZyme Description | Exo-poly-alpha-D-galacturonosidase | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 129616; End: 130947 Strand: + |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
GH28 | 70 | 424 | 2.3e-63 | 0.9076923076923077 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
COG5434 | Pgu1 | 4.56e-67 | 27 | 355 | 65 | 401 | Polygalacturonase [Carbohydrate transport and metabolism]. |
PLN02218 | PLN02218 | 9.08e-10 | 35 | 357 | 61 | 350 | polygalacturonase ADPG |
PLN02793 | PLN02793 | 1.50e-08 | 192 | 357 | 177 | 335 | Probable polygalacturonase |
pfam00295 | Glyco_hydro_28 | 3.40e-08 | 192 | 396 | 85 | 274 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
PLN02188 | PLN02188 | 3.47e-08 | 191 | 327 | 154 | 314 | polygalacturonase/glycoside hydrolase family protein |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
QCD42093.1 | 2.63e-316 | 1 | 443 | 1 | 443 |
QUT69838.1 | 1.13e-128 | 22 | 434 | 46 | 454 |
QUT42022.1 | 1.28e-127 | 22 | 434 | 46 | 454 |
BCA48701.1 | 1.32e-127 | 22 | 434 | 47 | 455 |
ACU63321.1 | 6.46e-121 | 22 | 442 | 44 | 457 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
5OLP_A | 5.65e-57 | 32 | 438 | 22 | 439 | Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482] |
3JUR_A | 5.04e-45 | 31 | 350 | 12 | 350 | Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima] |
2UVE_A | 2.71e-22 | 49 | 346 | 148 | 484 | Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica] |
4MXN_A | 3.42e-15 | 43 | 221 | 21 | 175 | Crystalstructure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_B Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_C Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_D Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
A7PZL3 | 1.80e-24 | 58 | 422 | 77 | 422 | Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1 |
P15922 | 8.83e-18 | 46 | 397 | 152 | 522 | Exo-poly-alpha-D-galacturonosidase OS=Dickeya chrysanthemi OX=556 GN=pehX PE=1 SV=1 |
P27644 | 1.93e-13 | 198 | 413 | 28 | 249 | Polygalacturonase OS=Rhizobium radiobacter OX=358 GN=pgl PE=2 SV=1 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
0.000191 | 0.169117 | 0.830492 | 0.000067 | 0.000073 | 0.000065 |
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