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CAZyme Information: MGYG000001910_00718

You are here: Home > Sequence: MGYG000001910_00718

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Duncaniella dubosii
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Muribaculaceae; Duncaniella; Duncaniella dubosii
CAZyme ID MGYG000001910_00718
CAZy Family GH143
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1107 MGYG000001910_6|CGC1 126782.01 5.9418
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001910 3154435 MAG Denmark Europe
Gene Location Start: 60824;  End: 64147  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001910_00718.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH143 20 570 1.1e-270 0.9892086330935251
GH142 633 1099 8.4e-225 0.9958246346555324

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam13088 BNR_2 7.80e-08 264 339 167 247
BNR repeat-like domain. This family of proteins contains BNR-like repeats suggesting these proteins may act as sialidases.
pfam17389 Bac_rhamnosid6H 2.35e-06 756 906 107 246
Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
COG3408 GDB1 7.27e-06 757 961 346 551
Glycogen debranching enzyme (alpha-1,6-glucosidase) [Carbohydrate transport and metabolism].
PRK10137 PRK10137 4.00e-05 824 947 581 712
alpha-glucosidase; Provisional
pfam01204 Trehalase 0.006 824 873 308 357
Trehalase. Trehalase (EC:3.2.1.28) is known to recycle trehalose to glucose. Trehalose is a physiological hallmark of heat-shock response in yeast and protects of proteins and membranes against a variety of stresses. This family is found in conjunction with pfam07492 in fungi.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QCD40902.1 0.0 1 1107 1 1107
QJR63716.1 0.0 1 1107 1 1103
QJR67979.1 0.0 1 1107 1 1103
QJR72315.1 0.0 1 1107 1 1103
QJR59518.1 0.0 1 1107 1 1103

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5MQR_A 0.0 20 1107 23 1107
SialidaseBT_1020 [Bacteroides thetaiotaomicron]
5MQS_A 0.0 20 1107 23 1107
SialidaseBT_1020 [Bacteroides thetaiotaomicron]
6M5A_A 4.16e-24 629 1102 280 810
Crystalstructure of GH121 beta-L-arabinobiosidase HypBA2 from Bifidobacterium longum [Bifidobacterium longum]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
E8MGH9 3.82e-23 629 1102 311 841
Beta-L-arabinobiosidase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=hypBA2 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000692 0.935404 0.063229 0.000225 0.000222 0.000205

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001910_00718.