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CAZyme Information: MGYG000001910_01767
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Duncaniella dubosii | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Muribaculaceae; Duncaniella; Duncaniella dubosii | |||||||||||
| CAZyme ID | MGYG000001910_01767 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 28669; End: 30102 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 90 | 443 | 6.6e-77 | 0.9292307692307692 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG5434 | Pgu1 | 1.43e-75 | 49 | 370 | 67 | 392 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| PLN02793 | PLN02793 | 4.29e-19 | 61 | 413 | 49 | 373 | Probable polygalacturonase |
| pfam00295 | Glyco_hydro_28 | 1.19e-18 | 217 | 418 | 85 | 284 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| PLN03003 | PLN03003 | 1.95e-15 | 61 | 388 | 20 | 303 | Probable polygalacturonase At3g15720 |
| PLN02188 | PLN02188 | 5.75e-15 | 53 | 456 | 25 | 397 | polygalacturonase/glycoside hydrolase family protein |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AGK84773.1 | 0.0 | 1 | 477 | 1 | 477 |
| QCD42468.1 | 0.0 | 1 | 477 | 1 | 474 |
| CAJ19131.1 | 6.24e-216 | 48 | 477 | 18 | 448 |
| ADY35504.1 | 1.39e-213 | 9 | 476 | 6 | 460 |
| AND21958.1 | 4.29e-203 | 44 | 476 | 8 | 441 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5OLP_A | 1.69e-89 | 62 | 452 | 42 | 441 | Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482] |
| 3JUR_A | 1.59e-85 | 47 | 389 | 10 | 365 | Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima] |
| 1BHE_A | 1.13e-20 | 85 | 437 | 30 | 361 | ChainA, POLYGALACTURONASE [Pectobacterium carotovorum] |
| 3ZPP_A | 7.35e-07 | 67 | 320 | 26 | 282 | Structureof the Streptococcus pneumoniae surface protein and adhesin PfbA [Streptococcus pneumoniae TIGR4] |
| 4MR0_A | 1.21e-06 | 49 | 320 | 100 | 374 | Crystalstructure of PfbA, a surface adhesin of Streptococcus pneumoniae [Streptococcus pneumoniae R6],4MR0_B Crystal structure of PfbA, a surface adhesin of Streptococcus pneumoniae [Streptococcus pneumoniae R6] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| A7PZL3 | 1.72e-37 | 63 | 437 | 61 | 424 | Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1 |
| P18192 | 1.80e-20 | 85 | 437 | 56 | 387 | Endo-polygalacturonase OS=Pectobacterium carotovorum subsp. carotovorum OX=555 GN=peh PE=3 SV=1 |
| P27644 | 6.81e-20 | 220 | 365 | 25 | 174 | Polygalacturonase OS=Rhizobium radiobacter OX=358 GN=pgl PE=2 SV=1 |
| P26509 | 8.02e-20 | 85 | 437 | 56 | 387 | Endo-polygalacturonase OS=Pectobacterium parmentieri OX=1905730 GN=pehA PE=1 SV=1 |
| Q9LW07 | 1.26e-18 | 61 | 457 | 20 | 372 | Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g15720 PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000348 | 0.998911 | 0.000186 | 0.000190 | 0.000175 | 0.000159 |