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CAZyme Information: MGYG000001912_00004

You are here: Home > Sequence: MGYG000001912_00004

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UMGS1839 sp900555545
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Acutalibacteraceae; UMGS1839; UMGS1839 sp900555545
CAZyme ID MGYG000001912_00004
CAZy Family GH18
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
763 MGYG000001912_1|CGC1 83674.68 6.0215
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001912 1976012 MAG Denmark Europe
Gene Location Start: 4774;  End: 7065  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001912_00004.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH18 136 413 3.4e-44 0.8108108108108109

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd02874 GH18_CFLE_spore_hydrolase 1.37e-67 133 420 29 313
Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination. CFLE is expressed as an inactive preprotein (called SleB) in the forespore compartment of sporulating cells. SleB translocates across the forespore inner membrane and is deposited as a mature enzyme in the cortex layer of the spore. As part of a sensory mechanism capable of initiating germination, CFLE degrades a spore-specific peptidoglycan constituent called muramic-acid delta-lactam that comprises the outer cortex. CFLE has a C-terminal glycosyl hydrolase family 18 (GH18) catalytic domain as well as two N-terminal LysM peptidoglycan-binding domains. In addition to SleB, this family includes YaaH, YdhD, and YvbX from Bacillus subtilis.
COG3858 YaaH 2.84e-58 83 412 93 410
Spore germination protein YaaH [Cell cycle control, cell division, chromosome partitioning].
pfam00704 Glyco_hydro_18 7.80e-32 163 411 63 306
Glycosyl hydrolases family 18.
smart00636 Glyco_18 1.44e-31 133 411 29 333
Glyco_18 domain.
cd06549 GH18_trifunctional 2.00e-24 165 411 61 292
GH18 domain of an uncharacterized family of bacterial proteins, which share a common three-domain architecture: an N-terminal glycosyl hydrolase family 18 (GH18) domain, a glycosyl transferase family 2 domain, and a C-terminal polysaccharide deacetylase domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BCI61558.1 1.13e-264 1 692 1 676
QHS23529.1 1.63e-107 25 492 30 495
AFS78333.1 3.12e-107 100 424 30 357
AYA76298.1 2.14e-106 107 462 92 449
QDP41482.1 7.33e-105 9 418 10 401

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3CZ8_A 1.37e-26 183 412 90 311
ChainA, Putative sporulation-specific glycosylase ydhD [Bacillus subtilis subsp. subtilis str. 168],3CZ8_B Chain B, Putative sporulation-specific glycosylase ydhD [Bacillus subtilis subsp. subtilis str. 168]
4WIW_A 1.38e-22 133 408 37 328
ChainA, Glycoside hydrolase family 18 [Desulfitobacterium hafniense DCB-2],4WIW_B Chain B, Glycoside hydrolase family 18 [Desulfitobacterium hafniense DCB-2],4WIW_C Chain C, Glycoside hydrolase family 18 [Desulfitobacterium hafniense DCB-2],4WIW_D Chain D, Glycoside hydrolase family 18 [Desulfitobacterium hafniense DCB-2],4WIW_E Chain E, Glycoside hydrolase family 18 [Desulfitobacterium hafniense DCB-2],4WIW_F Chain F, Glycoside hydrolase family 18 [Desulfitobacterium hafniense DCB-2]
5JH8_A 2.66e-19 113 425 8 315
Crystalstructure of chitinase from Chromobacterium violaceum ATCC 12472 [Chromobacterium violaceum ATCC 12472]
4Q6T_A 8.53e-17 187 429 99 344
Thecrystal structure of a class V chitininase from Pseudomonas fluorescens Pf-5 [Pseudomonas protegens Pf-5]
4S3K_A 7.26e-15 189 409 200 412
ChainA, Spore germination protein YaaH [Priestia megaterium QM B1551]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O31682 2.83e-61 107 318 2 212
Putative glycosylase YkvQ OS=Bacillus subtilis (strain 168) OX=224308 GN=ykvQ PE=3 SV=1
O05495 5.04e-25 183 409 182 400
Putative sporulation-specific glycosylase YdhD OS=Bacillus subtilis (strain 168) OX=224308 GN=ydhD PE=1 SV=2
O32258 8.65e-23 71 420 12 339
Uncharacterized glycosylase YvbX OS=Bacillus subtilis (strain 168) OX=224308 GN=yvbX PE=3 SV=1
P37531 7.11e-17 179 409 183 408
Cortical fragment-lytic enzyme OS=Bacillus subtilis (strain 168) OX=224308 GN=sleL PE=1 SV=2
P0DPJ9 2.17e-14 193 409 202 409
Cortical fragment-lytic enzyme OS=Bacillus anthracis OX=1392 GN=sleL PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999492 0.000466 0.000024 0.000001 0.000001 0.000015

TMHMM  Annotations      download full data without filtering help

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