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CAZyme Information: MGYG000001920_00982

You are here: Home > Sequence: MGYG000001920_00982

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola sp900546355
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola sp900546355
CAZyme ID MGYG000001920_00982
CAZy Family GH10
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
756 82232.82 3.9046
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001920 3068459 MAG Denmark Europe
Gene Location Start: 21554;  End: 23824  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.8

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH10 485 743 1.9e-42 0.6798679867986799

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
smart00633 Glyco_10 6.77e-27 486 742 54 263
Glycosyl hydrolase family 10.
pfam00331 Glyco_hydro_10 1.62e-25 486 744 96 310
Glycosyl hydrolase family 10.
COG3693 XynA 4.02e-18 493 740 126 335
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].
pfam00331 Glyco_hydro_10 2.31e-11 63 137 11 85
Glycosyl hydrolase family 10.
COG3693 XynA 1.06e-07 61 138 32 109
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QIU93949.1 6.75e-229 1 746 1 725
QDM11106.1 3.71e-228 1 746 1 725
QGT73069.1 4.38e-227 1 746 1 725
QUR44907.1 6.19e-227 1 746 1 725
QRQ48288.1 5.43e-222 1 748 3 718

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1US3_A 6.39e-12 507 749 291 516
Nativexylanase10C from Cellvibrio japonicus [Cellvibrio japonicus]
1US2_A 6.39e-12 490 749 250 516
Xylanase10C(mutant E385A) from Cellvibrio japonicus in complex with xylopentaose [Cellvibrio japonicus]
4W8L_A 2.27e-11 487 739 106 338
Structureof GH10 from Paenibacillus barcinonensis [Paenibacillus barcinonensis],4W8L_B Structure of GH10 from Paenibacillus barcinonensis [Paenibacillus barcinonensis],4W8L_C Structure of GH10 from Paenibacillus barcinonensis [Paenibacillus barcinonensis]
4XUY_A 2.66e-11 487 746 102 302
Crystalstructure of an endo-beta-1,4-xylanase (glycoside hydrolase family 10/GH10) enzyme from Aspergillus niger [Aspergillus niger CBS 513.88],4XUY_B Crystal structure of an endo-beta-1,4-xylanase (glycoside hydrolase family 10/GH10) enzyme from Aspergillus niger [Aspergillus niger CBS 513.88]
6FHE_A 2.75e-11 484 739 120 335
Highlyactive enzymes by automated modular backbone assembly and sequence design [synthetic construct]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q59675 4.00e-11 507 749 375 600
Endo-beta-1,4-xylanase Xyn10C OS=Cellvibrio japonicus OX=155077 GN=xyn10C PE=1 SV=2
A2QFV7 1.83e-10 487 746 127 327
Probable endo-1,4-beta-xylanase C OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=xlnC PE=1 SV=1
C5J411 2.44e-10 487 746 127 327
Probable endo-1,4-beta-xylanase C OS=Aspergillus niger OX=5061 GN=xlnC PE=2 SV=2
O59859 3.26e-10 487 746 127 327
Endo-1,4-beta-xylanase OS=Aspergillus aculeatus OX=5053 GN=xynIA PE=3 SV=1
O69230 3.75e-10 487 739 472 704
Endo-1,4-beta-xylanase C OS=Paenibacillus barcinonensis OX=198119 GN=xynC PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000000 0.000007 1.000041 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001920_00982.