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CAZyme Information: MGYG000001921_00639

You are here: Home > Sequence: MGYG000001921_00639

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Verrucomicrobiota; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia;
CAZyme ID MGYG000001921_00639
CAZy Family GH36
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
675 74114.04 8.6254
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001921 2759672 MAG Denmark Europe
Gene Location Start: 282283;  End: 284310  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001921_00639.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam05691 Raffinose_syn 2.48e-34 178 643 189 726
Raffinose synthase or seed imbibition protein Sip1. This family consists of several raffinose synthase proteins, also known as seed imbibition (Sip1) proteins. Raffinose (O-alpha- D-galactopyranosyl- (1-->6)- O-alpha- D-glucopyranosyl-(1<-->2)- O-beta- D-fructofuranoside) is a widespread oligosaccharide in plant seeds and other tissues. Raffinose synthase (EC:2.4.1.82) is the key enzyme that channels sucrose into the raffinose oligosaccharide pathway. Raffinose family oligosaccharides (RFOs) are ubiquitous in plant seeds and are thought to play critical roles in the acquisition of tolerance to desiccation and seed longevity. Raffinose synthases are alkaline alpha-galactosidases and are solely responsible for RFO breakdown in germinating maize seeds, whereas acidic galactosidases appear to have other functions. Glycoside hydrolase family 36 can be split into 11 families, GH36A to GH36K. This family includes enzymes from GH36C.
PLN02684 PLN02684 3.77e-32 159 593 177 654
Probable galactinol--sucrose galactosyltransferase
PLN02219 PLN02219 6.77e-29 176 491 187 546
probable galactinol--sucrose galactosyltransferase 2
PLN02355 PLN02355 7.49e-26 178 516 193 579
probable galactinol--sucrose galactosyltransferase 1
PLN02711 PLN02711 7.96e-18 179 497 204 580
Probable galactinol--sucrose galactosyltransferase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QBH16060.1 0.0 1 675 1 675
QWP66281.1 0.0 1 675 1 675
QHV55278.1 0.0 1 675 1 675
QHV52908.1 0.0 1 675 1 675
QHV57649.1 0.0 1 675 1 675

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q8RX87 6.07e-33 129 516 149 568
Probable galactinol--sucrose galactosyltransferase 6 OS=Arabidopsis thaliana OX=3702 GN=RFS6 PE=2 SV=2
Q84VX0 1.27e-26 178 516 188 574
Probable galactinol--sucrose galactosyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=RFS1 PE=2 SV=1
Q94A08 4.08e-26 178 496 188 550
Probable galactinol--sucrose galactosyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=RFS2 PE=2 SV=2
Q9FND9 6.16e-19 78 497 129 588
Probable galactinol--sucrose galactosyltransferase 5 OS=Arabidopsis thaliana OX=3702 GN=RFS5 PE=1 SV=1
Q5VQG4 8.13e-19 179 497 216 586
Galactinol--sucrose galactosyltransferase OS=Oryza sativa subsp. japonica OX=39947 GN=RFS PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000243 0.999194 0.000148 0.000146 0.000126 0.000127

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001921_00639.