logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000001925_01103

You are here: Home > Sequence: MGYG000001925_01103

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola sp900544675
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola sp900544675
CAZyme ID MGYG000001925_01103
CAZy Family PL15
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
851 MGYG000001925_11|CGC3 96475.41 4.7008
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001925 3441241 MAG Denmark Europe
Gene Location Start: 60016;  End: 62571  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001925_01103.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL15 508 664 7.2e-50 0.9850746268656716

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam16332 DUF4962 2.98e-77 52 459 6 445
Domain of unknown function (DUF4962). This family consists of uncharacterized proteins around 870 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.
pfam07940 Hepar_II_III 1.58e-06 526 701 35 188
Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QIU94214.1 0.0 10 848 5 846
QDM11441.1 0.0 24 848 18 844
QUT78344.1 0.0 24 848 18 844
CBK68010.1 0.0 24 848 5 831
QUT32653.1 0.0 24 848 18 844

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6LJA_A 1.14e-100 14 796 11 827
ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393]
6LJL_A 5.97e-98 14 796 11 827
ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393]
3A0O_A 2.32e-25 268 678 259 661
Crystalstructure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58],3A0O_B Crystal structure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000002 0.000503 0.999511 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001925_01103.