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CAZyme Information: MGYG000001925_01905

You are here: Home > Sequence: MGYG000001925_01905

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola sp900544675
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola sp900544675
CAZyme ID MGYG000001925_01905
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
494 MGYG000001925_25|CGC1 54757.74 6.3882
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001925 3441241 MAG Denmark Europe
Gene Location Start: 38197;  End: 39681  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001925_01905.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 92 280 1e-77 0.994535519125683

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 2.14e-08 9 283 10 280
Pectate lyase [Carbohydrate transport and metabolism].
smart00656 Amb_all 4.36e-06 103 272 13 175
Amb_all domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADY37156.1 5.35e-296 1 493 1 484
QGT73501.1 3.41e-279 5 494 2 498
QRQ55765.1 4.85e-279 5 494 2 498
SCV08373.1 4.85e-279 5 494 2 498
ALJ48955.1 4.85e-279 5 494 2 498

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B8NQQ7 2.27e-46 37 491 18 418
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q5B297 3.30e-46 41 487 22 411
Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1
Q2UB83 1.63e-44 37 491 18 418
Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1
Q4WL88 8.57e-44 39 491 21 419
Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1
B0XMA2 1.19e-43 39 491 21 419
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000321 0.998985 0.000218 0.000162 0.000156 0.000149

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001925_01905.