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CAZyme Information: MGYG000001927_01161

You are here: Home > Sequence: MGYG000001927_01161

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella sp900547005
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp900547005
CAZyme ID MGYG000001927_01161
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
969 MGYG000001927_14|CGC1 103184.99 4.764
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001927 2803818 MAG Denmark Europe
Gene Location Start: 34959;  End: 37868  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001927_01161.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 480 644 6.9e-34 0.8168316831683168
CBM77 865 959 2.1e-17 0.9029126213592233

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 4.96e-35 341 777 1 345
Pectate lyase [Carbohydrate transport and metabolism].
pfam18283 CBM77 1.05e-22 864 966 6 108
Carbohydrate binding module 77. This domain is the non-catalytic carbohydrate binding module 77 (CBM77) present in Ruminococcus flavefaciens. CBMs fulfil a critical targeting function in plant cell wall depolymerisation. In CBM77, a cluster of conserved basic residues (Lys1092, Lys1107 and Lys1162) confer calcium-independent recognition of homogalacturonan.
smart00656 Amb_all 2.85e-21 483 646 17 190
Amb_all domain.
pfam00544 Pec_lyase_C 1.06e-07 481 642 33 211
Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue.
pfam13229 Beta_helix 0.005 552 685 22 147
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QOR20273.1 8.31e-183 269 807 35 551
CBW15186.1 1.38e-182 269 807 50 566
QOR18408.1 1.24e-181 268 807 63 580
QCD40816.1 2.40e-180 225 815 10 588
QCP73706.1 2.40e-180 225 815 10 588

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1PCL_A 1.77e-09 432 642 33 276
ChainA, PECTATE LYASE E [Dickeya chrysanthemi]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A1CYB8 3.05e-12 483 697 93 298
Probable pectate lyase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyA PE=3 SV=1
B0XT32 5.48e-12 483 697 93 298
Probable pectate lyase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyA PE=3 SV=1
Q4WIT0 5.48e-12 483 697 93 298
Probable pectate lyase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyA PE=3 SV=1
A2QV36 1.83e-10 483 699 95 302
Probable pectate lyase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=plyA PE=3 SV=1
Q9C2Z0 1.83e-10 483 699 95 302
Pectate lyase A OS=Aspergillus niger OX=5061 GN=plyA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000495 0.998681 0.000214 0.000214 0.000195 0.000175

TMHMM  Annotations      download full data without filtering help

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