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CAZyme Information: MGYG000001927_02231

You are here: Home > Sequence: MGYG000001927_02231

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella sp900547005
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp900547005
CAZyme ID MGYG000001927_02231
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
753 81365.22 6.2798
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001927 2803818 MAG Denmark Europe
Gene Location Start: 4299;  End: 6560  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001927_02231.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 83 269 2.5e-79 0.994535519125683

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
smart00656 Amb_all 1.12e-04 85 227 3 151
Amb_all domain.
pfam18884 TSP3_bac 0.003 498 519 1 22
Bacterial TSP3 repeat. This entry contains a novel bacterial thrombospondin type 3 repeat which differs from the typical consensus by containing a glutamate in place of one of the calcium binding aspartate residues.
COG3866 PelB 0.004 74 227 73 236
Pectate lyase [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QCD39200.1 5.26e-216 29 753 25 782
QCP72891.1 5.26e-216 29 753 25 782
QUT75603.1 2.47e-177 19 552 3 496
QUT77823.1 7.30e-176 29 549 50 523
QDO69223.1 3.11e-165 29 541 42 511

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B8NQQ7 4.18e-40 28 541 18 414
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
B0XMA2 3.70e-39 30 541 21 415
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1
Q4WL88 5.04e-39 30 541 21 415
Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1
Q2UB83 6.72e-39 28 541 18 414
Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1
A1DPF0 2.34e-38 30 541 21 415
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000427 0.998721 0.000187 0.000260 0.000193 0.000179

TMHMM  Annotations      download full data without filtering help

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