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CAZyme Information: MGYG000001937_01026

You are here: Home > Sequence: MGYG000001937_01026

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UBA7173 sp001701135
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Muribaculaceae; UBA7173; UBA7173 sp001701135
CAZyme ID MGYG000001937_01026
CAZy Family GT19
CAZyme Description Lipid-A-disaccharide synthase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
400 44188.39 9.6697
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001937 2244087 MAG Denmark Europe
Gene Location Start: 59264;  End: 60466  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001937_01026.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT19 10 381 3e-105 0.9858757062146892

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK00025 lpxB 1.67e-112 6 397 1 373
lipid-A-disaccharide synthase; Reviewed
COG0763 LpxB 2.49e-107 6 400 1 380
Lipid A disaccharide synthetase [Cell wall/membrane/envelope biogenesis].
pfam02684 LpxB 1.42e-79 10 397 2 373
Lipid-A-disaccharide synthetase. This is a family of lipid-A-disaccharide synthetases, EC:2.4.2.128. These enzymes catalyze the reaction: UDP-2,3-bis(3-hydroxytetradecanoyl) glucosamine + 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate <=> UDP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6 -beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate. These enzymes catalyze the fist disaccharide step in the synthesis of lipid-A-disaccharide.
TIGR00215 lpxB 8.63e-65 11 397 10 384
lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]
PRK14089 PRK14089 1.18e-52 8 357 3 312
lipid-A-disaccharide synthase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QCD36425.1 3.02e-132 7 400 1 375
QQR08529.1 1.45e-126 7 395 1 370
ASB37800.1 1.45e-126 7 395 1 370
ANU64105.1 1.45e-126 7 395 1 370
QCP71596.1 4.63e-126 7 400 1 393

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5W8S_A 1.08e-39 1 397 1 379
LipidA Disaccharide Synthase (LpxB)-7 solubilizing mutations [Escherichia coli BL21(DE3)],5W8X_A Lipid A Disaccharide Synthase (LpxB)-7 solubilizing mutations-Bound to UDP [Escherichia coli BL21(DE3)]
5W8N_A 2.92e-39 1 397 1 379
LipidA Disaccharide Synthase (LpxB)-6 solubilizing mutations [Escherichia coli BL21(DE3)]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q1D393 9.76e-66 6 397 4 376
Lipid-A-disaccharide synthase OS=Myxococcus xanthus (strain DK1622) OX=246197 GN=lpxB PE=3 SV=1
Q1INL4 1.89e-61 7 396 2 375
Lipid-A-disaccharide synthase OS=Koribacter versatilis (strain Ellin345) OX=204669 GN=lpxB PE=3 SV=1
Q3JAC1 1.80e-59 1 394 1 373
Lipid-A-disaccharide synthase OS=Nitrosococcus oceani (strain ATCC 19707 / BCRC 17464 / JCM 30415 / NCIMB 11848 / C-107) OX=323261 GN=lpxB PE=3 SV=1
Q74AT9 2.53e-58 1 399 1 380
Lipid-A-disaccharide synthase OS=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) OX=243231 GN=lpxB PE=3 SV=1
B3E4H8 2.66e-57 6 396 6 377
Lipid-A-disaccharide synthase OS=Trichlorobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) OX=398767 GN=lpxB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000044 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001937_01026.