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CAZyme Information: MGYG000001938_00211
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | CAG-873 sp001701165 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Muribaculaceae; CAG-873; CAG-873 sp001701165 | |||||||||||
| CAZyme ID | MGYG000001938_00211 | |||||||||||
| CAZy Family | GT19 | |||||||||||
| CAZyme Description | Lipid-A-disaccharide synthase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 6746; End: 7888 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GT19 | 1 | 355 | 6.6e-111 | 0.9858757062146892 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PRK00025 | lpxB | 1.98e-113 | 1 | 355 | 6 | 359 | lipid-A-disaccharide synthase; Reviewed |
| COG0763 | LpxB | 1.20e-102 | 1 | 356 | 6 | 363 | Lipid A disaccharide synthetase [Cell wall/membrane/envelope biogenesis]. |
| pfam02684 | LpxB | 4.29e-78 | 1 | 345 | 3 | 350 | Lipid-A-disaccharide synthetase. This is a family of lipid-A-disaccharide synthetases, EC:2.4.2.128. These enzymes catalyze the reaction: UDP-2,3-bis(3-hydroxytetradecanoyl) glucosamine + 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate <=> UDP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6 -beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate. These enzymes catalyze the fist disaccharide step in the synthesis of lipid-A-disaccharide. |
| TIGR00215 | lpxB | 1.28e-67 | 1 | 344 | 10 | 355 | lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides] |
| PRK14089 | PRK14089 | 6.79e-50 | 3 | 307 | 8 | 286 | lipid-A-disaccharide synthase. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QCD36425.1 | 1.57e-134 | 3 | 370 | 7 | 372 |
| QQR08529.1 | 5.35e-134 | 3 | 372 | 7 | 374 |
| ASB37800.1 | 5.35e-134 | 3 | 372 | 7 | 374 |
| ANU64105.1 | 5.35e-134 | 3 | 372 | 7 | 374 |
| AHF12800.1 | 5.14e-113 | 1 | 369 | 5 | 370 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5W8S_A | 1.84e-40 | 1 | 372 | 11 | 381 | LipidA Disaccharide Synthase (LpxB)-7 solubilizing mutations [Escherichia coli BL21(DE3)],5W8X_A Lipid A Disaccharide Synthase (LpxB)-7 solubilizing mutations-Bound to UDP [Escherichia coli BL21(DE3)] |
| 5W8N_A | 4.99e-40 | 1 | 372 | 11 | 381 | LipidA Disaccharide Synthase (LpxB)-6 solubilizing mutations [Escherichia coli BL21(DE3)] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q1D393 | 3.42e-74 | 1 | 371 | 9 | 377 | Lipid-A-disaccharide synthase OS=Myxococcus xanthus (strain DK1622) OX=246197 GN=lpxB PE=3 SV=1 |
| Q1INL4 | 1.62e-71 | 3 | 372 | 8 | 378 | Lipid-A-disaccharide synthase OS=Koribacter versatilis (strain Ellin345) OX=204669 GN=lpxB PE=3 SV=1 |
| Q39T49 | 5.87e-69 | 1 | 371 | 11 | 379 | Lipid-A-disaccharide synthase OS=Geobacter metallireducens (strain ATCC 53774 / DSM 7210 / GS-15) OX=269799 GN=lpxB PE=3 SV=1 |
| Q74AT9 | 5.06e-67 | 1 | 371 | 11 | 379 | Lipid-A-disaccharide synthase OS=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) OX=243231 GN=lpxB PE=3 SV=1 |
| Q2LVL8 | 1.94e-66 | 1 | 365 | 8 | 371 | Lipid-A-disaccharide synthase OS=Syntrophus aciditrophicus (strain SB) OX=56780 GN=lpxB PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000066 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |