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CAZyme Information: MGYG000001940_02024
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Ruminococcus sp002438605 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Ruminococcus; Ruminococcus sp002438605 | |||||||||||
| CAZyme ID | MGYG000001940_02024 | |||||||||||
| CAZy Family | CBM2 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 114; End: 4250 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CBM2 | 151 | 243 | 1.2e-20 | 0.9108910891089109 |
| CBM2 | 46 | 136 | 3.6e-17 | 0.9207920792079208 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| cd00198 | vWFA | 3.33e-19 | 645 | 794 | 4 | 160 | Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains. |
| smart00327 | VWA | 4.35e-19 | 644 | 796 | 2 | 164 | von Willebrand factor (vWF) type A domain. VWA domains in extracellular eukaryotic proteins mediate adhesion via metal ion-dependent adhesion sites (MIDAS). Intracellular VWA domains and homologues in prokaryotes have recently been identified. The proposed VWA domains in integrin beta subunits have recently been substantiated using sequence-based methods. |
| pfam00092 | VWA | 5.18e-19 | 645 | 809 | 3 | 170 | von Willebrand factor type A domain. |
| pfam00553 | CBM_2 | 5.21e-15 | 151 | 233 | 4 | 87 | Cellulose binding domain. Two tryptophan residues are involved in cellulose binding. Cellulose binding domain found in bacteria. |
| smart00637 | CBD_II | 1.30e-14 | 157 | 243 | 3 | 88 | CBD_II domain. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QUL54870.1 | 4.04e-123 | 42 | 930 | 46 | 922 |
| CDZ23468.1 | 4.54e-118 | 23 | 889 | 15 | 849 |
| CBK93270.1 | 3.44e-72 | 35 | 920 | 117 | 877 |
| QEH69379.1 | 5.75e-41 | 42 | 339 | 119 | 408 |
| ADU21934.1 | 8.96e-38 | 42 | 407 | 46 | 467 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6BT9_A | 1.18e-12 | 144 | 225 | 573 | 654 | ChitinaseChiA74 from Bacillus thuringiensis [Bacillus thuringiensis],6BT9_B Chitinase ChiA74 from Bacillus thuringiensis [Bacillus thuringiensis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P64906 | 5.84e-08 | 158 | 232 | 50 | 125 | Uncharacterized protein Mb2009 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) OX=233413 GN=BQ2027_MB2009 PE=3 SV=1 |
| P9WLQ0 | 5.84e-08 | 158 | 232 | 50 | 125 | Uncharacterized protein MT2041 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=MT2041 PE=3 SV=1 |
| P9WLQ1 | 5.84e-08 | 158 | 232 | 50 | 125 | Uncharacterized protein Rv1987 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=Rv1987 PE=1 SV=1 |
| P14768 | 3.44e-07 | 152 | 238 | 33 | 118 | Endo-1,4-beta-xylanase A OS=Cellvibrio japonicus (strain Ueda107) OX=498211 GN=xynA PE=1 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as LIPO
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000635 | 0.386030 | 0.612696 | 0.000302 | 0.000178 | 0.000142 |