CAZyme Information: MGYG000001948_00638

Basic Information

• Species: Muribaculum sp002492595
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Muribaculaceae; Muribaculum; Muribaculum sp002492595
• CAZyme ID: MGYG000001948_00638
• CAZy Family: GH3
• CAZyme Description: Beta-hexosaminidase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
990	MGYG000001948_4|CGC1	106951.79	9.1527

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001948	2811075	MAG	Denmark	Europe

• Gene Location: Start: 117825; End: 120797 Strand: -

Full Sequence      

MDEIMKRVLIIMSLLVATAFHVGAVQPKLLSHSKGGDRDAWVDSVFSSLTMEQRVGQLVV
PVVDPTHIATAKQVIYRYVKTEGVGGLLFSKGSIDQYATLIDYAQSIAKVPLMITLDGEW
GLSMRIPGTTRFPYNMGLGAIADENLLYDYGREVARQCKLMGITVNFAPVLDVNSNPDNP
VIGYRSFGEDADRVARLGIAYSRGLEDGGVMSVSKHFPGHGDTSVDSHKSMPTIDHSAEV
MRDVDLMPFRRYIDDGLSGVMVGHLNVPSLDSTGVPASMSHRIITDLLKNDMGFRGMVFT
DALAMKGAIVGENNCVAALMAGADVLLSPSSVKGDIAAVLAAVKSGKISESSINERCRKM
LEYKYALGLSVGHKAVSSASLKGKLNSPEADAVNRKLVSAMIACVRNDDDLLPVRDIERK
SIAVVNIGEGKGNTFAQYCGKYADVDAYGTTTAFTAAQIASIEKHDIVIAAVYNDKSASV
NALKQLKGCSGLVTVFFMNPYKMSKFAPLGSKAVLLVGENGELAQEYGAQAVFGGIRVNG
SLPVNVKGIAPLGACVGLVKTRLGYTSPAAMGFDSSLGKRVDSLVNVGLRTGAFPGCQVL
VAKGGNVIIDRSYGYVDAAKTRRVNDSTMYDIASVSKVAGTLPGLMLAYDEGLYKLDDPV
SKYVEGLKSGDKSDITIRQMLLHESGLPASLSIPGIVMDTATYKGRLIAYRQRGANTIKI
SRGVYGNNTARMRKDITSASESKDFPMKIGRGVYVGAATRDTLMQRIFDSKLRQSKNYLY
SDLNFALLMAMEEKVTGKKHDEFVEKRVYGPIGATRTCYVPLAKNHKASEIAPTEKDNFL
RRQTVHGYVHDELAAFSGGVQGNAGLFSTANDLGKLCQMWLNGGSYGGRQIMSPSTVKLF
TTTKSNKSRRWLGFDGPDTKNEDKTPTAPLASPSTYGHIGFTGTCFWVDPDNELIYVFLC
NRVNPSRDNSAFTRLNIRPAIMNAVYEAMK

Enzyme Prediction     

No EC number prediction in MGYG000001948_00638.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH3	105	327	1.9e-60	0.9768518518518519

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam00933	Glyco_hydro_3	5.64e-83	50	362	1	315	Glycosyl hydrolase family 3 N terminal domain.
COG1472	BglX	4.52e-79	49	425	1	360	Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
PRK03642	PRK03642	3.32e-56	567	990	29	432	putative periplasmic esterase; Provisional
PRK05337	PRK05337	3.60e-49	84	327	26	278	beta-hexosaminidase; Provisional
COG1680	AmpC	1.07e-43	595	988	54	384	CubicO group peptidase, beta-lactamase class C family [Defense mechanisms].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QCD35538.1	0.0	1	990	1	990
ASB36988.1	0.0	23	990	22	991
ANU62524.1	0.0	23	990	22	991
QQR10146.1	0.0	23	990	22	991
AHF12964.1	1.16e-313	5	989	1	987

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3BMX_A	1.35e-60	43	553	36	624	Beta-N-hexosaminidase(YbbD) from Bacillus subtilis [Bacillus subtilis],3BMX_B Beta-N-hexosaminidase (YbbD) from Bacillus subtilis [Bacillus subtilis],3NVD_A Structure of YBBD in complex with pugnac [Bacillus subtilis],3NVD_B Structure of YBBD in complex with pugnac [Bacillus subtilis]
3LK6_A	3.91e-60	43	553	10	598	ChainA, Lipoprotein ybbD [Bacillus subtilis],3LK6_B Chain B, Lipoprotein ybbD [Bacillus subtilis],3LK6_C Chain C, Lipoprotein ybbD [Bacillus subtilis],3LK6_D Chain D, Lipoprotein ybbD [Bacillus subtilis]
4GYJ_A	7.01e-60	43	553	40	628	Crystalstructure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1) [Bacillus subtilis subsp. subtilis str. 168],4GYJ_B Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1) [Bacillus subtilis subsp. subtilis str. 168],4GYK_A Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1211) [Bacillus subtilis subsp. subtilis str. 168],4GYK_B Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1211) [Bacillus subtilis subsp. subtilis str. 168]
6K5J_A	4.32e-59	48	395	10	367	Structureof a glycoside hydrolase family 3 beta-N-acetylglucosaminidase from Paenibacillus sp. str. FPU-7 [Paenibacillaceae]
3SQL_A	8.45e-55	83	364	57	346	CrystalStructure of Glycoside Hydrolase from Synechococcus [Synechococcus sp. PCC 7002],3SQL_B Crystal Structure of Glycoside Hydrolase from Synechococcus [Synechococcus sp. PCC 7002],3SQM_A Crystal Structure of Glycoside Hydrolase from Synechococcus Complexed with N-acetyl-D-glucosamine [Synechococcus sp. PCC 7002],3SQM_B Crystal Structure of Glycoside Hydrolase from Synechococcus Complexed with N-acetyl-D-glucosamine [Synechococcus sp. PCC 7002],3SQM_C Crystal Structure of Glycoside Hydrolase from Synechococcus Complexed with N-acetyl-D-glucosamine [Synechococcus sp. PCC 7002],3SQM_D Crystal Structure of Glycoside Hydrolase from Synechococcus Complexed with N-acetyl-D-glucosamine [Synechococcus sp. PCC 7002]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P40406	7.39e-60	43	553	36	624	Beta-hexosaminidase OS=Bacillus subtilis (strain 168) OX=224308 GN=nagZ PE=1 SV=1
P48823	5.37e-47	73	547	57	597	Beta-hexosaminidase A OS=Pseudoalteromonas piscicida OX=43662 GN=cht60 PE=1 SV=1
Q8XBJ0	5.02e-45	563	990	25	432	Putative D-alanyl-D-alanine carboxypeptidase OS=Escherichia coli O157:H7 OX=83334 GN=yfeW PE=3 SV=1
P77619	3.52e-43	563	990	25	432	Putative D-alanyl-D-alanine carboxypeptidase OS=Escherichia coli (strain K12) OX=83333 GN=yfeW PE=1 SV=2
B5R4I5	1.27e-41	563	990	25	432	Putative D-alanyl-D-alanine carboxypeptidase OS=Salmonella enteritidis PT4 (strain P125109) OX=550537 GN=yfeW PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000243	0.999125	0.000166	0.000147	0.000146	0.000132

TMHMM  Annotations     

start	end
7	25