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CAZyme Information: MGYG000001950_00455

You are here: Home > Sequence: MGYG000001950_00455

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Gastranaerophilus phascolarctosicola
Lineage Bacteria; Cyanobacteria; Vampirovibrionia; Gastranaerophilales; Gastranaerophilaceae; Gastranaerophilus; Gastranaerophilus phascolarctosicola
CAZyme ID MGYG000001950_00455
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
482 MGYG000001950_21|CGC1 54761.16 8.769
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001950 1886233 MAG Denmark Europe
Gene Location Start: 15879;  End: 17327  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001950_00455.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 95 269 8.7e-53 0.994535519125683

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam18884 TSP3_bac 3.23e-04 405 425 1 21
Bacterial TSP3 repeat. This entry contains a novel bacterial thrombospondin type 3 repeat which differs from the typical consensus by containing a glutamate in place of one of the calcium binding aspartate residues.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AKD03746.1 2.59e-91 44 452 39 457
QNL41084.1 2.20e-90 43 453 57 521
QUT78076.1 5.04e-89 43 453 57 523
QDM11673.1 5.04e-89 43 453 57 523
QGT73503.1 5.04e-89 43 453 57 523

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q4WL88 3.51e-43 1 450 1 415
Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1
B0XMA2 6.75e-43 44 450 23 415
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1
A1DPF0 1.28e-41 44 450 23 415
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1
B8NQQ7 6.40e-41 44 450 22 414
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q2UB83 2.35e-40 44 450 22 414
Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999856 0.000142 0.000001 0.000001 0.000001 0.000029

TMHMM  Annotations      download full data without filtering help

start end
13 35