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CAZyme Information: MGYG000001952_00368

You are here: Home > Sequence: MGYG000001952_00368

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Lachnoclostridium_A;
CAZyme ID MGYG000001952_00368
CAZy Family GH73
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
679 70257.75 4.4462
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001952 2903653 MAG Denmark Europe
Gene Location Start: 7144;  End: 9183  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001952_00368.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4193 LytD 3.53e-19 382 530 106 244
Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism].
pfam08239 SH3_3 2.40e-10 46 107 1 54
Bacterial SH3 domain.
pfam12733 Cadherin-like 2.01e-08 560 631 5 88
Cadherin-like beta sandwich domain. This domain is found in several bacterial, metazoan and chlorophyte algal proteins. A profile-profile comparison recovered the cadherin domain and a comparison of the predicted structure of this domain with the crystal structure of the cadherin showed a congruent seven stranded secondary structure. The domain is widespread in bacteria and seen in the firmicutes, actinobacteria, certain proteobacteria, bacteroides and chlamydiae with an expansion in Clostridium. In contrast, it is limited in its distribution in eukaryotes suggesting that it was derived through lateral transfer from bacteria. In prokaryotes, this domain is widely fused to other domains such as FNIII (Fibronectin Type III), TIG, SLH (S-layer homology), discoidin, cell-wall-binding repeat domain and alpha-amylase-like glycohydrolases. These associations are suggestive of a carbohydrate-binding function for this cadherin-like domain. In animal proteins it is associated with an ATP-grasp domain.
smart00287 SH3b 3.94e-07 38 103 1 58
Bacterial SH3 domain homologues.
COG4991 YraI 1.00e-06 24 105 22 107
Uncharacterized conserved protein YraI [Function unknown].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QRV21758.1 6.53e-234 3 643 2 619
ADL03932.1 6.53e-234 3 643 2 619
SET60659.1 1.08e-219 3 643 2 620
CBK77705.1 1.73e-219 1 676 1 671
QJU23484.1 1.38e-216 1 656 1 706

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6FXO_A 2.81e-11 382 530 98 243
ChainA, Bifunctional autolysin [Staphylococcus aureus subsp. aureus Mu50]
4PI7_A 3.13e-07 377 521 85 225
ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PI9_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PIA_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50]
4PI8_A 1.85e-06 377 521 85 225
ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q5HH31 1.29e-09 382 530 1110 1255
Bifunctional autolysin OS=Staphylococcus aureus (strain COL) OX=93062 GN=atl PE=3 SV=1
Q6GI31 1.29e-09 382 530 1111 1256
Bifunctional autolysin OS=Staphylococcus aureus (strain MRSA252) OX=282458 GN=atl PE=3 SV=1
A7X0T9 1.29e-09 382 530 1109 1254
Bifunctional autolysin OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) OX=418127 GN=atl PE=3 SV=2
Q931U5 1.29e-09 382 530 1102 1247
Bifunctional autolysin OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) OX=158878 GN=atl PE=1 SV=2
P0C5Z8 1.29e-09 382 530 1109 1254
Bifunctional autolysin OS=Staphylococcus aureus OX=1280 GN=atl PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.001118 0.997991 0.000292 0.000256 0.000175 0.000157

TMHMM  Annotations      download full data without filtering help

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