logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000001954_00035

You are here: Home > Sequence: MGYG000001954_00035

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Enterocloster;
CAZyme ID MGYG000001954_00035
CAZy Family GH73
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
691 71501.93 4.4032
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001954 3305855 MAG Denmark Europe
Gene Location Start: 39943;  End: 42018  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001954_00035.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4193 LytD 6.33e-16 377 533 100 245
Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism].
pfam08239 SH3_3 3.63e-09 47 107 1 54
Bacterial SH3 domain.
pfam12733 Cadherin-like 1.39e-08 553 631 1 86
Cadherin-like beta sandwich domain. This domain is found in several bacterial, metazoan and chlorophyte algal proteins. A profile-profile comparison recovered the cadherin domain and a comparison of the predicted structure of this domain with the crystal structure of the cadherin showed a congruent seven stranded secondary structure. The domain is widespread in bacteria and seen in the firmicutes, actinobacteria, certain proteobacteria, bacteroides and chlamydiae with an expansion in Clostridium. In contrast, it is limited in its distribution in eukaryotes suggesting that it was derived through lateral transfer from bacteria. In prokaryotes, this domain is widely fused to other domains such as FNIII (Fibronectin Type III), TIG, SLH (S-layer homology), discoidin, cell-wall-binding repeat domain and alpha-amylase-like glycohydrolases. These associations are suggestive of a carbohydrate-binding function for this cadherin-like domain. In animal proteins it is associated with an ATP-grasp domain.
smart00287 SH3b 6.17e-08 41 108 3 63
Bacterial SH3 domain homologues.
COG4991 YraI 2.20e-07 27 111 20 102
Uncharacterized conserved protein YraI [Function unknown].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ASN95383.1 1.35e-258 1 642 1 692
QRP39925.1 1.35e-258 1 642 1 692
ANU49989.1 2.74e-258 1 642 1 686
QQR01104.1 2.74e-258 1 642 1 686
QIX93811.1 4.91e-257 1 642 1 686

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6FXO_A 1.28e-10 382 532 96 243
ChainA, Bifunctional autolysin [Staphylococcus aureus subsp. aureus Mu50]
4PI7_A 3.20e-07 379 516 86 212
ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PI9_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PIA_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50]
4PI8_A 1.89e-06 379 516 86 212
ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q8CPQ1 1.03e-09 383 532 1189 1334
Bifunctional autolysin OS=Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) OX=176280 GN=atl PE=3 SV=1
Q8NX96 3.96e-09 382 532 1108 1255
Bifunctional autolysin OS=Staphylococcus aureus (strain MW2) OX=196620 GN=atl PE=3 SV=1
Q6GAG0 3.96e-09 382 532 1102 1249
Bifunctional autolysin OS=Staphylococcus aureus (strain MSSA476) OX=282459 GN=atl PE=3 SV=1
O33635 4.02e-09 383 532 1189 1334
Bifunctional autolysin OS=Staphylococcus epidermidis OX=1282 GN=atl PE=1 SV=1
Q5HQB9 4.02e-09 383 532 1189 1334
Bifunctional autolysin OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) OX=176279 GN=atl PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000816 0.998161 0.000345 0.000240 0.000195 0.000186

TMHMM  Annotations      download full data without filtering help

start end
12 34