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CAZyme Information: MGYG000001963_00235

You are here: Home > Sequence: MGYG000001963_00235

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola sp000434735
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola sp000434735
CAZyme ID MGYG000001963_00235
CAZy Family GH2
CAZyme Description Evolved beta-galactosidase subunit alpha
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1356 MGYG000001963_3|CGC1 153083.35 8.08
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001963 3288738 MAG Denmark Europe
Gene Location Start: 2720;  End: 6790  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001963_00235.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH2 67 1017 4.5e-202 0.973404255319149
CBM32 1231 1352 1.2e-28 0.8790322580645161

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK10340 ebgA 0.0 40 1153 4 1021
cryptic beta-D-galactosidase subunit alpha; Reviewed
PRK09525 lacZ 0.0 40 1104 17 999
beta-galactosidase.
COG3250 LacZ 4.29e-119 70 1015 5 804
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
smart01038 Bgal_small_N 8.20e-77 827 1129 1 272
Beta galactosidase small chain. This domain comprises the small chain of dimeric beta-galactosidases EC:3.2.1.23. This domain is also found in single chain beta-galactosidase.
pfam02836 Glyco_hydro_2_C 2.33e-75 415 691 8 300
Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QRO23809.1 0.0 24 1356 25 1348
QFQ12980.1 0.0 1 1356 1 1344
ANQ61423.1 0.0 1 1356 1 1341
CUA19662.1 0.0 1 1356 1 1341
QCQ42797.1 0.0 1 1356 1 1341

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6S6Z_A 6.34e-178 38 1130 2 980
Structureof beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_B Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_C Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_D Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_E Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_F Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_G Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_H Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8]
6SD0_A 6.51e-178 38 1130 3 981
Structureof beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_B Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_C Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_D Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8]
3DEC_A 4.79e-164 39 1135 6 1000
ChainA, Beta-galactosidase [Bacteroides thetaiotaomicron VPI-5482]
3BGA_A 2.95e-156 39 1136 9 1005
Crystalstructure of beta-galactosidase from Bacteroides thetaiotaomicron VPI-5482 [Bacteroides thetaiotaomicron VPI-5482],3BGA_B Crystal structure of beta-galactosidase from Bacteroides thetaiotaomicron VPI-5482 [Bacteroides thetaiotaomicron VPI-5482]
6TSH_A 2.47e-121 19 1104 12 1012
Beta-galactosidasein complex with deoxygalacto-nojirimycin [Escherichia coli],6TSH_B Beta-galactosidase in complex with deoxygalacto-nojirimycin [Escherichia coli],6TSH_C Beta-galactosidase in complex with deoxygalacto-nojirimycin [Escherichia coli],6TSH_D Beta-galactosidase in complex with deoxygalacto-nojirimycin [Escherichia coli],6TSK_A Beta-galactosidase in complex with L-ribose [Escherichia coli],6TSK_B Beta-galactosidase in complex with L-ribose [Escherichia coli],6TSK_C Beta-galactosidase in complex with L-ribose [Escherichia coli],6TSK_D Beta-galactosidase in complex with L-ribose [Escherichia coli],6TTE_A Beta-galactosidase in complex with PETG [Escherichia coli],6TTE_B Beta-galactosidase in complex with PETG [Escherichia coli],6TTE_C Beta-galactosidase in complex with PETG [Escherichia coli],6TTE_D Beta-galactosidase in complex with PETG [Escherichia coli]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O52847 1.73e-178 39 1132 19 1034
Beta-galactosidase OS=Priestia megaterium (strain DSM 319 / IMG 1521) OX=592022 GN=bgaM PE=3 SV=1
Q56307 3.57e-177 38 1130 3 981
Beta-galactosidase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=lacZ PE=1 SV=2
A1SWB8 2.57e-145 39 1104 12 1007
Beta-galactosidase OS=Psychromonas ingrahamii (strain 37) OX=357804 GN=lacZ PE=3 SV=1
A5F5U6 7.40e-144 39 1104 12 991
Beta-galactosidase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395) OX=345073 GN=lacZ PE=3 SV=2
Q9K9C6 2.19e-141 46 1104 16 985
Beta-galactosidase OS=Alkalihalobacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=lacZ PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000608 0.998450 0.000267 0.000229 0.000210 0.000179

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001963_00235.