CAZyme Information: MGYG000001963_01082

Basic Information

• Species: Phocaeicola sp000434735
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola sp000434735
• CAZyme ID: MGYG000001963_01082
• CAZy Family: PL15
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
834	MGYG000001963_18|CGC2	94132.52	8.8647

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001963	3288738	MAG	Denmark	Europe

• Gene Location: Start: 37804; End: 40308 Strand: +

Full Sequence      

MKRNTVFFVLLLTFAFIARLQAQMPASLYEEWRKTSYPAGDAVVSTNPSPLLWKSDKYWE
KRKVTYNVYLSRNAAFPKAETQSSMNQRYCFYNPHRKLESGKWYWKYETVENGKVSSSEV
YSFIVPESADGLVTPTAEEFRNNISKSHPRVMNYGRSMADIHRDAPQHRLYKSIINTAKE
AAAKQIYRGAVTDPNPATARRLNQKAGKEVALYHELLEGYTLSADNDMKDALLKRTDVLL
SWPTNDLLGSKVLTALALGYDMLYDELTAETKQQILTTIDKQFKEGLARWPGFTEARQVE
NHFWQMELAGNFTAALATLGELESATEMLDYTYGLFIARFPNLATQDGGWNEGEGYYSVN
QTAVVDMALLLKKLGGIDIFKMGWYRNLPDYFTYFSPVASPVSGFGDMHDRVETGGLKGR
SEMLTIGCEENNPYALYRFFQSVRPVESFFGATADEKYWRKPLAKTEPWYQIVNNISVAP
KRAKAPANQPTDKVFYGVGAAAMHSCLADPAKDVTVFFRSSPFGSKGHAHADQNSFNISR
HGERLFYPTGYYTSFADLHSLTSYKHTRACNSMLINGYGQAFGHEGYGWIKRHIEGENMS
YVCGEAGEAYKKTTDKQFADFMKEKGIKQDDHFGMGDTPMKKFERHVVFVRPDVVVIYDV
LEADEASEWSLLLHTMRPSTVDKNKLTVETSRSYAEAQVFGSTAVKGSVTNKFFSPANDF
KKKYQNGTPDQYHATFCNTEKVKQMRYLTIINMCDKGAKVTALKSSGKGKWKIGDLQIEA
EMDATKTPHATIKYGKEQLSIGAEETTLNGTNGAISSKNQMPTGNYNYLKAMNK

Enzyme Prediction     

No EC number prediction in MGYG000001963_01082.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL15	507	660	7.3e-45	0.9701492537313433

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam16332	DUF4962	2.63e-72	27	435	2	441	Domain of unknown function (DUF4962). This family consists of uncharacterized proteins around 870 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.
pfam07940	Hepar_II_III	7.28e-08	511	605	19	120	Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QRQ49706.1	7.41e-275	17	822	18	819
QUE51929.1	5.34e-249	23	810	26	792
QDM11441.1	8.42e-101	22	810	38	809
QUT78344.1	8.42e-101	22	810	38	809
QNL40851.1	4.41e-100	22	810	38	809

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6LJA_A	2.87e-92	27	753	32	786	ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393]
6LJL_A	1.42e-89	27	753	32	786	ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393]
3A0O_A	1.03e-38	38	676	28	662	Crystalstructure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58],3A0O_B Crystal structure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58]
3AFL_A	1.80e-37	38	676	28	662	Crystalstructure of exotype alginate lyase Atu3025 H531A complexed with alginate trisaccharide [Agrobacterium fabrum str. C58]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000407	0.998749	0.000210	0.000208	0.000192	0.000172

TMHMM  Annotations     

start	end
5	22