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CAZyme Information: MGYG000001963_01365

You are here: Home > Sequence: MGYG000001963_01365

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola sp000434735
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola sp000434735
CAZyme ID MGYG000001963_01365
CAZy Family PL15
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
871 MGYG000001963_26|CGC1 99343.03 6.8047
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001963 3288738 MAG Denmark Europe
Gene Location Start: 5158;  End: 7773  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001963_01365.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL15 537 692 5.3e-98 0.9935897435897436

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam16332 DUF4962 0.0 34 507 1 476
Domain of unknown function (DUF4962). This family consists of uncharacterized proteins around 870 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADV43624.1 0.0 1 871 1 868
QUT89921.1 0.0 1 871 1 868
ALJ58962.1 0.0 1 871 1 868
QDO67530.1 0.0 1 871 1 868
AVM58836.1 0.0 1 871 1 868

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6LJA_A 0.0 1 871 1 868
ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393]
6LJL_A 0.0 1 871 1 868
ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393]
3A0O_A 4.17e-33 31 725 8 677
Crystalstructure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58],3A0O_B Crystal structure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58]
3AFL_A 6.93e-32 31 725 8 677
Crystalstructure of exotype alginate lyase Atu3025 H531A complexed with alginate trisaccharide [Agrobacterium fabrum str. C58]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000000 0.000000 1.000060 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001963_01365.