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CAZyme Information: MGYG000001963_01754

You are here: Home > Sequence: MGYG000001963_01754

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola sp000434735
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola sp000434735
CAZyme ID MGYG000001963_01754
CAZy Family GH30
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
488 MGYG000001963_38|CGC2 55154.88 7.2454
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001963 3288738 MAG Denmark Europe
Gene Location Start: 28631;  End: 30097  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001963_01754.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH30 29 482 5.9e-139 0.9933333333333333

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5520 XynC 3.32e-28 134 426 114 393
O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis].
pfam02055 Glyco_hydro_30 7.25e-13 58 295 22 261
Glycosyl hydrolase family 30 TIM-barrel domain.
pfam14587 Glyco_hydr_30_2 2.52e-09 138 367 121 366
O-Glycosyl hydrolase family 30.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QQT78450.1 9.67e-150 27 488 33 491
QRP59665.1 9.67e-150 27 488 33 491
ASM65029.1 9.67e-150 27 488 33 491
QUU06757.1 1.17e-106 27 352 33 355
QQY42684.1 1.96e-104 23 485 38 496

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6IUJ_A 1.10e-20 24 483 19 469
ChainA, GH30 Xylanase B [Talaromyces cellulolyticus CF-2612],6IUJ_B Chain B, GH30 Xylanase B [Talaromyces cellulolyticus CF-2612]
7O0E_A 1.73e-20 28 426 4 384
ChainA, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464],7O0E_G Chain G, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464]
6KRL_A 2.69e-20 38 483 104 540
Crystalstructure of GH30 xylanase B from Talaromyces cellulolyticus expressed by Pichia pastoris [Saccharomyces uvarum],6KRN_A Crystal structure of GH30 xylanase B from Talaromyces cellulolyticus expressed by Pichia pastoris in complex with aldotriuronic acid [Saccharomyces uvarum]
7NCX_AAA 1.19e-19 28 426 11 391
ChainAAA, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464]
4FMV_A 4.11e-18 27 485 3 386
CrystalStructure Analysis of a GH30 Endoxylanase from Clostridium papyrosolvens C71 [Ruminiclostridium papyrosolvens DSM 2782]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
G2Q1N4 1.90e-20 28 426 28 408
GH30 family xylanase OS=Myceliophthora thermophila (strain ATCC 42464 / BCRC 31852 / DSM 1799) OX=573729 GN=Xyn30A PE=1 SV=1
G5ECR8 8.41e-11 28 262 92 333
Putative glucosylceramidase 3 OS=Caenorhabditis elegans OX=6239 GN=gba-3 PE=3 SV=1
Q45070 1.53e-10 132 483 106 418
Glucuronoxylanase XynC OS=Bacillus subtilis (strain 168) OX=224308 GN=xynC PE=1 SV=1
Q6YK37 2.71e-10 132 486 107 422
Glucuronoxylanase XynC OS=Bacillus subtilis OX=1423 GN=xynC PE=3 SV=2
P17439 1.04e-09 29 249 86 312
Lysosomal acid glucosylceramidase OS=Mus musculus OX=10090 GN=Gba PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000474 0.993536 0.005326 0.000252 0.000203 0.000185

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001963_01754.