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CAZyme Information: MGYG000001963_01785

You are here: Home > Sequence: MGYG000001963_01785

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola sp000434735
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola sp000434735
CAZyme ID MGYG000001963_01785
CAZy Family GH110
CAZyme Description Alpha-1,3-galactosidase B
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
594 MGYG000001963_40|CGC1 67269.61 7.1735
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001963 3288738 MAG Denmark Europe
Gene Location Start: 3162;  End: 4946  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.-

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH110 25 593 2.3e-232 0.9945255474452555

CDD Domains      help

MGYG000001963_01785 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QQY40418.1 0.0 1 594 3 594
ABR37834.1 0.0 1 594 1 592
QUT56908.1 0.0 1 594 1 592
QQY44658.1 0.0 1 594 3 594
QTO27409.1 0.0 14 594 11 595

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7JW4_A 2.41e-73 21 592 23 592
Crystalstructure of PdGH110B in complex with D-galactose [Pseudoalteromonas distincta],7JW4_B Crystal structure of PdGH110B in complex with D-galactose [Pseudoalteromonas distincta]
7JWF_A 1.27e-72 21 592 23 592
Crystalstructure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_B Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_C Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_D Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q64XV2 0.0 11 594 8 595
Alpha-1,3-galactosidase B OS=Bacteroides fragilis (strain YCH46) OX=295405 GN=glaB PE=3 SV=1
Q5LGZ8 0.0 11 594 8 595
Alpha-1,3-galactosidase B OS=Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / CCUG 4856 / JCM 11019 / NCTC 9343 / Onslow) OX=272559 GN=glaB PE=1 SV=1
A6KWM0 0.0 1 594 1 592
Alpha-1,3-galactosidase B OS=Phocaeicola vulgatus (strain ATCC 8482 / DSM 1447 / JCM 5826 / CCUG 4940 / NBRC 14291 / NCTC 11154) OX=435590 GN=glaB1 PE=3 SV=1
A6L2M8 2.24e-300 13 592 8 590
Alpha-1,3-galactosidase B OS=Phocaeicola vulgatus (strain ATCC 8482 / DSM 1447 / JCM 5826 / CCUG 4940 / NBRC 14291 / NCTC 11154) OX=435590 GN=glaB2 PE=3 SV=1
A6LFT2 1.21e-275 10 592 7 588
Alpha-1,3-galactosidase B OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / CIP 104284 / JCM 5825 / NCTC 11152) OX=435591 GN=glaB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000305 0.998987 0.000189 0.000170 0.000163 0.000162

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001963_01785.