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CAZyme Information: MGYG000001963_02162

You are here: Home > Sequence: MGYG000001963_02162

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola sp000434735
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola sp000434735
CAZyme ID MGYG000001963_02162
CAZy Family GT5
CAZyme Description Glycogen synthase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
273 31102.2 4.5049
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001963 3288738 MAG Denmark Europe
Gene Location Start: 20318;  End: 21139  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001963_02162.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT5 5 226 1.3e-42 0.4449152542372881

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam08323 Glyco_transf_5 4.44e-51 6 226 1 214
Starch synthase catalytic domain.
PRK14098 PRK14098 2.03e-45 5 214 7 223
starch synthase.
cd03791 GT5_Glycogen_synthase_DULL1-like 5.27e-33 5 212 1 209
Glycogen synthase GlgA and similar proteins. This family is most closely related to the GT5 family of glycosyltransferases. Glycogen synthase (EC:2.4.1.21) catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
COG0297 GlgA 6.32e-24 5 182 2 171
Glycogen synthase [Carbohydrate transport and metabolism].
PRK00654 glgA 1.76e-23 5 183 2 161
glycogen synthase GlgA.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADY34869.1 6.96e-176 1 268 1 268
QRO25341.1 6.28e-168 1 273 1 273
QUT77703.1 1.82e-139 3 268 4 268
QDO69344.1 3.66e-139 3 268 4 268
AND20492.1 5.20e-139 1 270 1 270

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1RZU_A 5.45e-07 6 193 3 181
ChainA, Glycogen synthase 1 [Agrobacterium tumefaciens],1RZU_B Chain B, Glycogen synthase 1 [Agrobacterium tumefaciens]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B4SC83 1.03e-41 5 229 7 239
Glycogen synthase OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) OX=324925 GN=glgA PE=3 SV=1
B3EGV0 2.78e-41 5 231 7 241
Glycogen synthase OS=Chlorobium limicola (strain DSM 245 / NBRC 103803 / 6330) OX=290315 GN=glgA PE=3 SV=1
Q3B6C3 1.05e-39 5 203 7 201
Glycogen synthase OS=Chlorobium luteolum (strain DSM 273 / BCRC 81028 / 2530) OX=319225 GN=glgA PE=3 SV=1
A1BIY8 1.46e-39 5 202 7 200
Glycogen synthase OS=Chlorobium phaeobacteroides (strain DSM 266) OX=290317 GN=glgA PE=3 SV=1
B3QR00 5.40e-38 5 214 7 223
Glycogen synthase OS=Chlorobaculum parvum (strain DSM 263 / NCIMB 8327) OX=517417 GN=glgA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999870 0.000138 0.000011 0.000000 0.000000 0.000002

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001963_02162.