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CAZyme Information: MGYG000001977_01324

You are here: Home > Sequence: MGYG000001977_01324

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides;
CAZyme ID MGYG000001977_01324
CAZy Family GH30
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
535 MGYG000001977_40|CGC2 58718.01 4.7732
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001977 4322077 MAG Denmark Europe
Gene Location Start: 20853;  End: 22460  Strand: +

Full Sequence      Download help

MKLKYLYSLP  LLLSLMACSD  DSSATSGAPE  TPEQPDITNS  VEKLVTVDAG  QTFQMIAGFG60
ASDCWSPSFV  GKSWTSGRAG  ITELLFSSEI  ADGKPKGIGL  SQWRVNLGGG  SAQQGDASGI120
EDKSRRAESY  LKDDLTLDWS  RCEGQRYFMS  RAKELGCNNF  ILFSNTPPVQ  YTYNGKGFSA180
RGASSNLKTE  HYDDFARYMA  EVAAHYAGEG  YNVTHISPVN  EPQYNWEDGQ  EGSGWTNDQV240
AALARELDAS  LTASGLSTDI  LLGESGDWEY  LYKSKSDAGR  SNVLSAFFRE  GSSAYVGNLS300
HVKNLICGHS  YWTDGTWDGM  RNVRKQLAQA  AGQYNIDVWQ  SEWSMLGDGY  SSSEFVGYDA360
ASEMDIALYM  SKVIHNDLTV  AGVSSWSYWT  SMDVSRWGHK  NRFLLISLVP  SGGEYGDIEQ420
EGTYQATPTL  WVLGNYSRFI  RPGYKRIALT  LNETRSFFGS  AWISPDKDKI  VAVYTNTSDR480
NVRLGETHIG  WGAEARSVTT  YTTTGSKNLQ  ESAVASGSPV  LLESESVTTV  VYNLK535

Enzyme Prediction      help

EC 3.2.1.38

CAZyme Signature Domains help

Created with Snap26538010713316018721424026729432134737440142845448150845531GH30
Family Start End Evalue family coverage
GH30 45 531 2.5e-175 0.993801652892562

CDD Domains      download full data without filtering help

Created with Snap26538010713316018721424026729432134737440142845448150842393Glyco_hydr_30_244534XynC443501Glyco_hydro_30C
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam14587 Glyco_hydr_30_2 1.07e-127 42 393 1 357
O-Glycosyl hydrolase family 30.
COG5520 XynC 1.66e-12 44 534 35 430
O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis].
pfam17189 Glyco_hydro_30C 0.007 443 501 1 63
Glycosyl hydrolase family 30 beta sandwich domain.

CAZyme Hits      help

Created with Snap2653801071331601872142402672943213473744014284544815081535QUT97738.1|GH30_41535QUT61024.1|GH30_41535QQA29541.1|GH30_41535QUT66304.1|GH30_41535QUT34917.1|GH30_4
Hit ID E-Value Query Start Query End Hit Start Hit End
QUT97738.1 0.0 1 535 1 535
QUT61024.1 0.0 1 535 1 535
QQA29541.1 0.0 1 535 1 535
QUT66304.1 0.0 1 535 1 535
QUT34917.1 0.0 1 535 1 535

PDB Hits      download full data without filtering help

Created with Snap265380107133160187214240267294321347374401428454481508425313CLW_A455334FMV_A454846M5Z_A1875314CKQ_A1875314UQA_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
3CLW_A 2.88e-75 42 531 5 495
Crystalstructure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_B Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_C Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_D Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_E Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_F Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343]
4FMV_A 5.48e-15 45 533 5 387
CrystalStructure Analysis of a GH30 Endoxylanase from Clostridium papyrosolvens C71 [Ruminiclostridium papyrosolvens DSM 2782]
6M5Z_A 2.26e-13 45 484 25 407
ChainA, GH30 Xylanase C [Talaromyces cellulolyticus CF-2612],6M5Z_B Chain B, GH30 Xylanase C [Talaromyces cellulolyticus CF-2612]
4CKQ_A 1.35e-11 187 531 125 409
ChainA, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],4UQ9_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],4UQB_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],4UQC_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],4UQD_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],4UQE_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus]
4UQA_A 2.38e-11 187 531 125 409
ChainA, Carbohydrate Binding Family 6 [Acetivibrio thermocellus]

Swiss-Prot Hits      download full data without filtering help

Created with Snap26538010713316018721424026729432134737440142845448150842443sp|Q76FP5|6GAL_HYPRU45531sp|G2Q1N4|XY30A_MYCTT152533sp|Q45070|XYNC_BACSU
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q76FP5 2.66e-17 42 443 21 381
Endo-beta-1,6-galactanase OS=Hypocrea rufa OX=5547 GN=6GAL PE=1 SV=1
G2Q1N4 1.22e-10 45 531 29 470
GH30 family xylanase OS=Myceliophthora thermophila (strain ATCC 42464 / BCRC 31852 / DSM 1799) OX=573729 GN=Xyn30A PE=1 SV=1
Q45070 1.68e-08 152 533 101 421
Glucuronoxylanase XynC OS=Bacillus subtilis (strain 168) OX=224308 GN=xynC PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000034 0.021587 0.978344 0.000014 0.000016 0.000010

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001977_01324.