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CAZyme Information: MGYG000001977_01414

You are here: Home > Sequence: MGYG000001977_01414

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides;
CAZyme ID MGYG000001977_01414
CAZy Family GH55
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1000 MGYG000001977_45|CGC1 111991.81 6.3466
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001977 4322077 MAG Denmark Europe
Gene Location Start: 3190;  End: 6192  Strand: -

Full Sequence      Download help

MRNFQIMRYL  LIICWIISSV  LPGWAAGSSS  VYTQRPDDPE  AFYFTPENYG  FKADGKSDVT60
DALQEAINQV  KREKNFGILF  LPEGNYRISK  TIQIPSSIRL  IGYGKKRPVI  YLGADTPGFQ120
TTQNYMIWFT  GGLAQEGREP  SDANAGTFYS  AVSNVDFRID  KGNPQAIAIR  AHFAQHGFIN180
HCDIRIGSGK  AGIYDVGNEL  EDVRFYGGEY  GIISSRTSPG  WPMMMVDTYF  DGQRKAAVYS240
KEVGFAIVNM  HVKNTPVAFE  MAENLADRLH  VENSLWENIS  EAGVRVSVEG  NTFSQLNLVN300
VDCRNVPVLV  NYAQSGKEVA  GGAKMYKVKE  FTYGLVYQDL  NDASSFREIC  EIEPVAKLPV360
ALGKDLPALP  AMETWVNIRD  LGAKGDGETD  DTEVFEKAVS  LHKNIYVPQG  WYRLTRTLKM420
APGTKLIGLH  PFGTQFLLKE  SEPAFSGFGT  PVPLVESSEG  GDDILNGIGI  NTGAYNYRAV480
GCKWMASERS  YLNDVKFVGG  HGTLRKSTPN  ASGQSFYRWG  ERRISSPSSP  VTETGKDVAW540
DNQYWSLWIT  NNGGGTVKDV  WTASSYAASG  LYVSDTKTPG  RIYAMSLEHH  VRTEARFHNV600
ANWKIYAFQF  EEEGREGPDC  YMAEMSNCQN  IEMVNVWMYR  VIRAFMPKRI  GFRMWDCENI660
TFRNMHNYTQ  ILPVIEFPIY  DMSKALPVYS  WDFARLTVSG  SEKSLRSSCT  VVDKPVKLAA720
GFELATGATA  DSKGNIYFCE  NRLKKIYKWS  ADTEQLTLIA  DYPWKPFTLA  TDTQDNLLVI780
FRYDPQPGYM  VNGKQETVSR  LPDDNPMYSG  WGNSGWSALG  YSFNPNQVDA  TMKPMMRVAT840
ADVKKVQRVI  HPSSRWRGDF  DKVVASMPEY  SFIAPDGVTI  IPETYDLGRS  CALTVTVPGQ900
REPVYIVNEM  NKTTVQLSVG  QDGRLTEKEV  VCPYGQYSNV  TDADGNVYVA  DGEIFVYDKY960
GKEQRRIQVE  ERPISLAIGG  KQKDILFVTT  SSSFYGIKVR  1000

Enzyme Prediction      help

No EC number prediction in MGYG000001977_01414.

CAZyme Signature Domains help

Created with Snap5010015020025030035040045050055060065070075080085090095045613GH55
Family Start End Evalue family coverage
GH55 45 613 9.3e-93 0.7797297297297298

CDD Domains      download full data without filtering help

Created with Snap5010015020025030035040045050055060065070075080085090095049212Pectate_lyase_3375428Pectate_lyase_3921992SGL942990NHL_like_6374434PLN02218
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam12708 Pectate_lyase_3 1.82e-18 49 212 7 169
Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.
pfam12708 Pectate_lyase_3 1.73e-08 375 428 1 60
Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.
pfam08450 SGL 4.71e-07 921 992 166 246
SMP-30/Gluconolaconase/LRE-like region. This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30), gluconolactonase and luciferin-regenerating enzyme (LRE). SMP-30 is known to hydrolyze diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 and LRE.
cd14962 NHL_like_6 8.74e-05 942 990 65 119
Uncharacterized NHL-repeat domain in bacterial proteins. The NHL (NCL-1, HT2A and LIN-41) repeat is found in multiple tandem copies, typically as 6 instances. It is about 40 residues long and resembles the WD repeat and other beta-propeller structures.
PLN02218 PLN02218 1.78e-04 374 434 66 133
polygalacturonase ADPG

CAZyme Hits      help

Created with Snap5010015020025030035040045050055060065070075080085090095011000QPH57851.1|GH5511000QUU00134.1|GH5511000QMI79026.1|GH5511000QUT62546.1|GH5511000QQA31096.1|GH55
Hit ID E-Value Query Start Query End Hit Start Hit End
QPH57851.1 0.0 1 1000 1 1000
QUU00134.1 0.0 1 1000 1 1000
QMI79026.1 0.0 1 1000 1 1000
QUT62546.1 0.0 1 1000 1 1000
QQA31096.1 0.0 1 1000 1 1000

PDB Hits      download full data without filtering help

Created with Snap50100150200250300350400450500550600650700750800850900950474563EQN_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
3EQN_A 2.03e-15 47 456 53 480
ChainA, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQN_B Chain B, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQO_A Chain A, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQO_B Chain B, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.001771 0.996946 0.000694 0.000214 0.000178 0.000171

TMHMM  Annotations      download full data without filtering help

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