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CAZyme Information: MGYG000001992_01179

You are here: Home > Sequence: MGYG000001992_01179

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Collinsella sp900754525
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp900754525
CAZyme ID MGYG000001992_01179
CAZy Family GH140
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
437 MGYG000001992_84|CGC1 49262.4 4.6562
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001992 2010685 MAG Spain Europe
Gene Location Start: 7310;  End: 8623  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001992_01179.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH140 15 389 5.3e-89 0.8713592233009708

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam13204 DUF4038 1.05e-83 18 339 9 320
Protein of unknown function (DUF4038). A family of putative cellulases.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AZH70520.1 5.60e-308 1 435 1 435
ATP54527.1 9.90e-286 1 437 1 437
AEB07692.1 1.90e-205 1 435 1 456
QWT17210.1 6.80e-205 1 433 1 435
QRT29801.1 8.42e-154 3 433 1 422

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000058 0.000002 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001992_01179.