logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000001995_01062

You are here: Home > Sequence: MGYG000001995_01062

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Parabacteroides sp900541965
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides; Parabacteroides sp900541965
CAZyme ID MGYG000001995_01062
CAZy Family GH2
CAZyme Description Beta-galactosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1225 MGYG000001995_11|CGC1 137963.18 5.3846
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001995 4648473 MAG Spain Europe
Gene Location Start: 11915;  End: 15592  Strand: -

Full Sequence      Download help

MYICRNLYSS  YNMKLGKKQQ  RVTRMFTFCG  AIAAISLLGG  CSGTGTTAES  FERSDYYTRG60
IGQYPGNPKE  DFSPSLAPDK  ENYRNIALLR  SAFGSSSHDY  NLTAQLVTDG  IVTDKQPQYL120
DLLTPEGAAP  RREREWMIDE  GPYSRNTFSG  ADTYFQFTLN  NYSESADKLS  LVGTLIYDDK180
VAKGGYEIIC  QGSNDGKNWE  EIGKLSGSGL  PGKALSYRVP  VTDPNKQTEQ  VSMPVRKLDE240
TIPFKKGTAY  SDYRVLLKMA  GAHDWVFTEA  NFYNKGGLVE  MKPSQFFNSA  WMSATPGEEW300
LYVDLGSRSE  FDKVILHWVN  KAVKGKIQVS  DDALQWTDVA  ELPGGDELKD  EISLNGKKQA360
RYVRLLMQEL  GNGKNYILSE  IEVMGKGGLL  PQPVAMPAAS  KDKIYLSGGN  WKLQRASEVA420
ATGTEISTTG  FNPENWIVAT  VPGTVLSSYK  NIGAIANPDY  ADNQLHVSES  FFNSNFWYRD480
EFEVPEGFKQ  DRLFLNFDGI  NWKANVYVNG  KQVGRIEGAF  KRGQFDVTDV  VVPGKNVIAV540
EIIKNSHIGA  IKEKNRQSTD  FNGGILGADN  PTFHATIGWD  WIPTVRGRNI  GIWNDVSLTT600
TGKVTVADPL  VQSVLPLPDT  TSAKLTAEVI  VKNHDANAVK  GILEGKIGDI  TFQQPVELAA660
GEEKTVVFDA  KDFAQLNVQN  PRLWWPKGYG  EPNLYDANFT  FKIDDKVSDA  KDFKVGIRQM720
TFNEDNHILS  LFINGRRFIG  RGGNWGFSES  NLNYRGREYD  IAVAYHADMN  FTMLRNWVGM780
IGDEELYDAC  DRHGIMVWQD  FWLANPADGP  DPYYPEMFID  NAEDYVKRIR  SHASIGLYCG840
RNEGFPPEQI  DKALRRIVKE  DHPGIHYISS  SADDVVSGHG  PYRMLPAKEY  FTLETGNDKF900
HSERGMPNVM  TYESMLRTFS  PKGIWPQDNE  WGMHDYTREG  AQGCTSFNEI  IAKGYGEPQS960
AKEFAELAQW  VNYDGHRSLF  ESRSKNRKGL  LMWMSHPCWP  SMVWQTYDYY  FEPTAAYFAI1020
KKASEPLHIQ  WNPATDEVEV  VNYSAGSRKD  LTAKVQILNM  DASVAWEKEV  KIDSNEDTTN1080
KCIKLEFPEN  LSKVHFIKMV  LTENGKVVSD  NFYHRSLEEN  NYQALRELPK  VDLSTDIVVN1140
KEADGTWRAK  ATLENLTSTP  ALMVRINVVG  EKDGLQFLPV  FYTDNYFSLL  PGEKKEIDIH1200
WKDEDTRGNK  PNVTVSGYNV  LNKSK1225

Enzyme Prediction      help

No EC number prediction in MGYG000001995_01062.

CAZyme Signature Domains help

Created with Snap611221832453063674284905516126737357968579189801041110211633991092GH2
Family Start End Evalue family coverage
GH2 399 1092 1.2e-86 0.7047872340425532

CDD Domains      download full data without filtering help

Created with Snap61122183245306367428490551612673735796857918980104111021163390891LacZ11111220Ig_GlcNase434843PRK10150604718Glyco_hydro_2478843ebgA
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3250 LacZ 1.08e-40 390 891 1 455
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
pfam18368 Ig_GlcNase 6.41e-32 1111 1220 1 104
Exo-beta-D-glucosaminidase Ig-fold domain. This domain can be found in 2 glycoside hydrolase subfamily of beta-glucosaminidases (EC:3.2.1.165) such as CsxA, from Amycolatopsis orientalis that has exo-beta-D-glucosaminidase (exo-chitosanase) activity. It has an immunoglobulin-like topology.
PRK10150 PRK10150 2.22e-20 434 843 32 417
beta-D-glucuronidase; Provisional
pfam00703 Glyco_hydro_2 3.93e-16 604 718 1 106
Glycosyl hydrolases family 2. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.
PRK10340 ebgA 8.40e-13 478 843 113 449
cryptic beta-D-galactosidase subunit alpha; Reviewed

CAZyme Hits      help

Created with Snap61122183245306367428490551612673735796857918980104111021163131220QUT49978.1|GH2131220BAR52607.1|GH2131220AEW22509.1|GH2131220BAR49784.1|GH2131220QIX64986.1|GH2
Hit ID E-Value Query Start Query End Hit Start Hit End
QUT49978.1 0.0 13 1220 1 1207
BAR52607.1 0.0 13 1220 1 1208
AEW22509.1 0.0 13 1220 1 1208
BAR49784.1 0.0 13 1220 1 1208
QIX64986.1 0.0 13 1220 1 1206

PDB Hits      download full data without filtering help

Created with Snap6112218324530636742849055161267373579685791898010411102116338712202VZO_A38712202VZS_A38712202VZT_A38712202VZU_A43411445N6U_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
2VZO_A 3.54e-73 387 1220 35 891
Crystalstructure of Amycolatopsis orientalis exo-chitosanase CsxA [Amycolatopsis orientalis],2VZO_B Crystal structure of Amycolatopsis orientalis exo-chitosanase CsxA [Amycolatopsis orientalis]
2VZS_A 8.63e-73 387 1220 35 891
ChitosanProduct complex of Amycolatopsis orientalis exo-chitosanase CsxA [Amycolatopsis orientalis],2VZS_B Chitosan Product complex of Amycolatopsis orientalis exo-chitosanase CsxA [Amycolatopsis orientalis],2X05_A Inhibition of the exo-beta-D-glucosaminidase CsxA by a glucosamine- configured castanospermine and an amino-australine analogue [Amycolatopsis orientalis],2X05_B Inhibition of the exo-beta-D-glucosaminidase CsxA by a glucosamine- configured castanospermine and an amino-australine analogue [Amycolatopsis orientalis],2X09_A Inhibition of the exo-beta-D-glucosaminidase CsxA by a glucosamine- configured castanospermine and an amino-australine analogue [Amycolatopsis orientalis],2X09_B Inhibition of the exo-beta-D-glucosaminidase CsxA by a glucosamine- configured castanospermine and an amino-australine analogue [Amycolatopsis orientalis]
2VZT_A 1.56e-72 387 1220 35 891
Complexof Amycolatopsis orientalis exo-chitosanase CsxA E541A with PNP-beta-D-glucosamine [Amycolatopsis orientalis],2VZT_B Complex of Amycolatopsis orientalis exo-chitosanase CsxA E541A with PNP-beta-D-glucosamine [Amycolatopsis orientalis],2VZV_A Substrate Complex of Amycolatopsis orientalis exo-chitosanase CsxA E541A with chitosan [Amycolatopsis orientalis],2VZV_B Substrate Complex of Amycolatopsis orientalis exo-chitosanase CsxA E541A with chitosan [Amycolatopsis orientalis]
2VZU_A 2.24e-71 387 1220 35 891
Complexof Amycolatopsis orientalis exo-chitosanase CsxA D469A with PNP-beta-D-glucosamine [Amycolatopsis orientalis],2VZU_B Complex of Amycolatopsis orientalis exo-chitosanase CsxA D469A with PNP-beta-D-glucosamine [Amycolatopsis orientalis]
5N6U_A 3.27e-51 434 1144 41 778
Crystalstructure of Beta-D-Mannosidase from Dictyoglomus thermophilum. [Dictyoglomus thermophilum H-6-12],5N6U_B Crystal structure of Beta-D-Mannosidase from Dictyoglomus thermophilum. [Dictyoglomus thermophilum H-6-12],5N6U_C Crystal structure of Beta-D-Mannosidase from Dictyoglomus thermophilum. [Dictyoglomus thermophilum H-6-12],5N6U_D Crystal structure of Beta-D-Mannosidase from Dictyoglomus thermophilum. [Dictyoglomus thermophilum H-6-12]

Swiss-Prot Hits      download full data without filtering help

Created with Snap611221832453063674284905516126737357968579189801041110211634111219sp|Q5H7P5|EBM_LILLO3911224sp|Q82NR8|EBDG_STRAW4111219sp|Q75W54|EBM_ARATH3871220sp|Q56F26|EBDG_AMYOR4101220sp|Q4R1C4|EBDG_HYPJE
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q5H7P5 2.43e-92 411 1219 10 944
Mannosylglycoprotein endo-beta-mannosidase OS=Lilium longiflorum OX=4690 GN=EBM PE=1 SV=4
Q82NR8 8.98e-92 391 1224 39 900
Exo-beta-D-glucosaminidase OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680) OX=227882 GN=csxA PE=1 SV=1
Q75W54 8.96e-91 411 1219 13 935
Mannosylglycoprotein endo-beta-mannosidase OS=Arabidopsis thaliana OX=3702 GN=EBM PE=1 SV=3
Q56F26 3.51e-72 387 1220 35 891
Exo-beta-D-glucosaminidase OS=Amycolatopsis orientalis OX=31958 GN=csxA PE=1 SV=2
Q4R1C4 3.10e-71 410 1220 37 885
Exo-beta-D-glucosaminidase OS=Hypocrea jecorina OX=51453 GN=gls93 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.002084 0.205485 0.792289 0.000115 0.000025 0.000013

TMHMM  Annotations      download full data without filtering help

start end
26 48