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CAZyme Information: MGYG000001995_01924

You are here: Home > Sequence: MGYG000001995_01924

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Parabacteroides sp900541965
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides; Parabacteroides sp900541965
CAZyme ID MGYG000001995_01924
CAZy Family GH127
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
623 MGYG000001995_24|CGC4 69945.91 7.0384
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001995 4648473 MAG Spain Europe
Gene Location Start: 50698;  End: 52569  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001995_01924.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH127 69 529 9.8e-60 0.9083969465648855

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3533 COG3533 1.39e-63 31 545 13 515
Uncharacterized conserved protein, DUF1680 family [Function unknown].
pfam07944 Glyco_hydro_127 1.94e-63 57 530 24 503
Beta-L-arabinofuranosidase, GH127. One member of this family, from Bidobacterium longicum, UniProtKB:E8MGH8, has been characterized as an unusual beta-L-arabinofuranosidase enzyme, EC:3.2.1.185. It rleases l-arabinose from the l-arabinofuranose (Araf)-beta1,2-Araf disaccharide and also transglycosylates 1-alkanols with retention of the anomeric configuration. Terminal beta-l-arabinofuranosyl residues have been found in arabinogalactan proteins from a mumber of different plantt species. beta-l-Arabinofuranosyl linkages with 1-4 arabinofuranosides are also found in the sugar chains of extensin and solanaceous lectins, hydroxyproline (Hyp)2-rich glycoproteins that are widely observed in plant cell wall fractions. The critical residue for catalytic activity is Glu-338, in a ET/SCAS sequence context.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ARE60508.1 1.64e-234 26 623 18 620
QOY86860.1 6.50e-47 81 528 97 547
QHS51661.1 1.76e-42 81 555 123 608
ADH61394.1 1.15e-41 31 536 13 565
AXC10260.1 3.22e-41 81 531 133 592

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6EX6_A 1.56e-32 81 536 74 554
TheGH127, Beta-arabinofuranosidase, BT3674 [Bacteroides thetaiotaomicron VPI-5482],6EX6_B The GH127, Beta-arabinofuranosidase, BT3674 [Bacteroides thetaiotaomicron VPI-5482]
5MQO_A 1.83e-24 75 531 90 601
Glycosidehydrolase BT_1003 [Bacteroides thetaiotaomicron]
6YQH_AAA 6.08e-22 321 530 337 560
ChainAAA, Acetyl-CoA carboxylase, biotin carboxylase [Bacteroides thetaiotaomicron VPI-5482]
7EXU_A 2.00e-21 81 538 80 574
ChainA, Non-reducing end beta-L-arabinofuranosidase [Bifidobacterium longum subsp. longum JCM 1217]
3WRE_A 2.59e-21 81 538 80 574
Thecrystal structure of native HypBA1 from Bifidobacterium longum JCM 1217 [Bifidobacterium longum subsp. longum JCM 1217],3WRG_A The complex structure of HypBA1 with L-arabinose [Bifidobacterium longum subsp. longum JCM 1217]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
E8MGH8 1.42e-20 81 538 80 574
Non-reducing end beta-L-arabinofuranosidase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=hypBA1 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000328 0.999101 0.000158 0.000144 0.000137 0.000128

TMHMM  Annotations      download full data without filtering help

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