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CAZyme Information: MGYG000002006_02429

You are here: Home > Sequence: MGYG000002006_02429

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Lawsonibacter sp900754605
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Oscillospiraceae; Lawsonibacter; Lawsonibacter sp900754605
CAZyme ID MGYG000002006_02429
CAZy Family GH23
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1920 216777.3 5.1272
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002006 3005540 MAG Spain Europe
Gene Location Start: 3868;  End: 9630  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002006_02429.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4646 COG4646 5.50e-76 611 1138 1 540
Adenine-specific DNA methylase, N12 class [Replication, recombination and repair].
COG4646 COG4646 2.93e-29 1281 1470 441 637
Adenine-specific DNA methylase, N12 class [Replication, recombination and repair].
COG0827 YtxK 5.11e-12 425 588 168 341
Adenine-specific DNA methylase [Replication, recombination and repair].
cd18011 DEXDc_RapA 1.38e-10 1084 1332 1 173
DEXH-box helicase domain of RapA. In bacteria, RapA is an RNA polymerase (RNAP)-associated SWI2/SNF2 (switch/sucrose non-fermentable) protein that mediates RNAP recycling during transcription. The ATPase activity of RapA is stimulated by its interaction with RNAP and inhibited by its N-terminal domain. The conformational changes of RapA and its interaction with RNAP are essential for RNAP recycling. RapA is part of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
smart00487 DEXDc 2.50e-10 1082 1185 7 110
DEAD-like helicases superfamily.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ASV45029.1 0.0 319 1884 1548 3182
QIW86704.1 0.0 266 1899 1572 3265
QIW86628.1 0.0 266 1899 1572 3265
AEY69616.1 0.0 319 1902 1689 3344
AXF51455.1 0.0 292 1902 1753 3437

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q71TF8 1.32e-43 338 1671 51 1567
Defense against restriction protein B OS=Escherichia phage P1 OX=2886926 GN=darB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000013 0.000029 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002006_02429.