dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: MGYG000002007_01165

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Basic Information help

Species

Alistipes dispar

Lineage

Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; Alistipes dispar

CAZyme ID

MGYG000002007_01165

CAZy Family

GH2

CAZyme Description

Beta-galactosidase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
456	MGYG000002007_4\|CGC1	51318.77	5.6356

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002007	2708946	MAG	Spain	Europe

Gene Location

Start: 25793; End: 27163 Strand: -

Full Sequence Download help

Enzyme Prediction help

No EC number prediction in MGYG000002007_01165.

CAZyme Signature Domains help

Family	Start	End	Evalue	family coverage
GH2	92	448	1.4e-37	0.4175531914893617

CDD Domains download full data without filtering help

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
PRK09525	lacZ	3.64e-29	92	449	127	493	beta-galactosidase.
COG3250	LacZ	2.85e-22	46	451	65	437	Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
PRK10340	ebgA	4.00e-19	92	451	116	481	cryptic beta-D-galactosidase subunit alpha; Reviewed
pfam02836	Glyco_hydro_2_C	5.04e-16	322	445	32	160	Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.
pfam02837	Glyco_hydro_2_N	1.09e-06	92	149	72	129	Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. The domain binds the sugar moiety during the sugar-hydrolysis reaction.

CAZyme Hits help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
BBL07145.1	0.0	12	456	1	445
AFL78621.1	7.75e-229	12	456	1	452
BBL00145.1	2.67e-227	12	456	1	453
BBL11042.1	7.62e-227	12	456	1	453
BBL08251.1	7.62e-227	12	456	1	453

PDB Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3DEC_A	4.02e-27	92	456	129	496	ChainA, Beta-galactosidase [Bacteroides thetaiotaomicron VPI-5482]
3VD5_A	4.13e-27	92	449	155	521	E.coli (lacZ) beta-galactosidase (N460S) [Escherichia coli],3VD5_B E. coli (lacZ) beta-galactosidase (N460S) [Escherichia coli],3VD5_C E. coli (lacZ) beta-galactosidase (N460S) [Escherichia coli],3VD5_D E. coli (lacZ) beta-galactosidase (N460S) [Escherichia coli],3VD7_A E. coli (lacZ) beta-galactosidase (N460S) in complex with galactotetrazole [Escherichia coli],3VD7_B E. coli (lacZ) beta-galactosidase (N460S) in complex with galactotetrazole [Escherichia coli],3VD7_C E. coli (lacZ) beta-galactosidase (N460S) in complex with galactotetrazole [Escherichia coli],3VD7_D E. coli (lacZ) beta-galactosidase (N460S) in complex with galactotetrazole [Escherichia coli],3VD9_A E. coli (lacZ) beta-galactosidase (N460S) in complex with IPTG [Escherichia coli],3VD9_B E. coli (lacZ) beta-galactosidase (N460S) in complex with IPTG [Escherichia coli],3VD9_C E. coli (lacZ) beta-galactosidase (N460S) in complex with IPTG [Escherichia coli],3VD9_D E. coli (lacZ) beta-galactosidase (N460S) in complex with IPTG [Escherichia coli],4DUX_A E. coli (lacZ) beta-galactosidase (N460S) in complex with L-ribose [Escherichia coli K-12],4DUX_B E. coli (lacZ) beta-galactosidase (N460S) in complex with L-ribose [Escherichia coli K-12],4DUX_C E. coli (lacZ) beta-galactosidase (N460S) in complex with L-ribose [Escherichia coli K-12],4DUX_D E. coli (lacZ) beta-galactosidase (N460S) in complex with L-ribose [Escherichia coli K-12]
1JZ7_A	5.46e-27	92	449	126	492	E.COLI (lacZ) BETA-GALACTOSIDASE IN COMPLEX WITH GALACTOSE [Escherichia coli],1JZ7_B E. COLI (lacZ) BETA-GALACTOSIDASE IN COMPLEX WITH GALACTOSE [Escherichia coli],1JZ7_C E. COLI (lacZ) BETA-GALACTOSIDASE IN COMPLEX WITH GALACTOSE [Escherichia coli],1JZ7_D E. COLI (lacZ) BETA-GALACTOSIDASE IN COMPLEX WITH GALACTOSE [Escherichia coli],4TTG_A Beta-galactosidase (E. coli) in the presence of potassium chloride. [Escherichia coli],4TTG_B Beta-galactosidase (E. coli) in the presence of potassium chloride. [Escherichia coli],4TTG_C Beta-galactosidase (E. coli) in the presence of potassium chloride. [Escherichia coli],4TTG_D Beta-galactosidase (E. coli) in the presence of potassium chloride. [Escherichia coli]
3DYM_A	7.31e-27	92	449	126	492	ChainA, Beta-galactosidase [Escherichia coli K-12],3DYM_B Chain B, Beta-galactosidase [Escherichia coli K-12],3DYM_C Chain C, Beta-galactosidase [Escherichia coli K-12],3DYM_D Chain D, Beta-galactosidase [Escherichia coli K-12],3E1F_1 Chain 1, Beta-galactosidase [Escherichia coli K-12],3E1F_2 Chain 2, Beta-galactosidase [Escherichia coli K-12],3E1F_3 Chain 3, Beta-galactosidase [Escherichia coli K-12],3E1F_4 Chain 4, Beta-galactosidase [Escherichia coli K-12]
5A1A_A	9.79e-27	92	449	125	491	2.2A resolution cryo-EM structure of beta-galactosidase in complex with a cell-permeant inhibitor [Escherichia coli K-12],5A1A_B 2.2 A resolution cryo-EM structure of beta-galactosidase in complex with a cell-permeant inhibitor [Escherichia coli K-12],5A1A_C 2.2 A resolution cryo-EM structure of beta-galactosidase in complex with a cell-permeant inhibitor [Escherichia coli K-12],5A1A_D 2.2 A resolution cryo-EM structure of beta-galactosidase in complex with a cell-permeant inhibitor [Escherichia coli K-12]

Swiss-Prot Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
A9MQ82	4.91e-28	100	449	136	493	Beta-galactosidase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) OX=41514 GN=lacZ PE=3 SV=2
Q8FKG6	1.19e-27	71	449	106	493	Beta-galactosidase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=lacZ PE=3 SV=1
Q3Z583	2.13e-27	71	449	106	493	Beta-galactosidase OS=Shigella sonnei (strain Ss046) OX=300269 GN=lacZ PE=3 SV=1
Q32JB6	2.13e-27	92	449	127	493	Beta-galactosidase OS=Shigella dysenteriae serotype 1 (strain Sd197) OX=300267 GN=lacZ PE=3 SV=2
Q0TKT1	3.84e-27	71	449	106	493	Beta-galactosidase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) OX=362663 GN=lacZ PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000284	0.999033	0.000177	0.000184	0.000154	0.000133

TMHMM Annotations help

There is no transmembrane helices in MGYG000002007_01165.