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CAZyme Information: MGYG000002014_00628

You are here: Home > Sequence: MGYG000002014_00628

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Merdibacter sp900754715
Lineage Bacteria; Firmicutes; Bacilli; Erysipelotrichales; Erysipelotrichaceae; Merdibacter; Merdibacter sp900754715
CAZyme ID MGYG000002014_00628
CAZy Family GH123
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1317 MGYG000002014_18|CGC1 146922.55 4.0521
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002014 2253473 MAG Spain Europe
Gene Location Start: 3911;  End: 7864  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.53 3.2.1.-

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH123 523 1023 2.7e-132 0.9033457249070632

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam13320 DUF4091 5.95e-16 939 1007 1 66
Domain of unknown function (DUF4091). This presumed domain is functionally uncharacterized. This domain family is found in bacteria, archaea and eukaryotes, and is approximately 70 amino acids in length. There is a single completely conserved residue G that may be functionally important.
pfam02368 Big_2 6.41e-10 186 239 11 65
Bacterial Ig-like domain (group 2). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in bacterial and phage surface proteins such as intimins.
smart00635 BID_2 3.99e-08 407 473 2 69
Bacterial Ig-like domain 2.
pfam02368 Big_2 6.84e-07 1210 1269 15 77
Bacterial Ig-like domain (group 2). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in bacterial and phage surface proteins such as intimins.
COG5492 YjdB 2.41e-06 369 473 138 246
Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QIK86567.1 5.39e-161 262 1025 35 792
QUD71731.1 9.06e-159 28 1024 45 952
AYE33261.1 8.37e-150 247 1024 25 798
QAS61432.1 8.37e-150 247 1024 25 798
BAJ83606.1 8.89e-121 249 1040 28 820

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5FQE_A 3.05e-112 490 1024 16 560
Thedetails of glycolipid glycan hydrolysis by the structural analysis of a family 123 glycoside hydrolase from Clostridium perfringens [Clostridium perfringens],5FQE_B The details of glycolipid glycan hydrolysis by the structural analysis of a family 123 glycoside hydrolase from Clostridium perfringens [Clostridium perfringens],5FQF_A The details of glycolipid glycan hydrolysis by the structural analysis of a family 123 glycoside hydrolase from Clostridium perfringens [Clostridium perfringens],5FQF_B The details of glycolipid glycan hydrolysis by the structural analysis of a family 123 glycoside hydrolase from Clostridium perfringens [Clostridium perfringens],5FR0_A The details of glycolipid glycan hydrolysis by the structural analysis of a family 123 glycoside hydrolase from Clostridium perfringens [Clostridium perfringens]
5FQG_A 4.15e-111 490 1024 16 560
Thedetails of glycolipid glycan hydrolysis by the structural analysis of a family 123 glycoside hydrolase from Clostridium perfringens [Clostridium perfringens],5FQH_A The details of glycolipid glycan hydrolysis by the structural analysis of a family 123 glycoside hydrolase from Clostridium perfringens [Clostridium perfringens]
5L7V_A 7.43e-74 527 1018 50 528
ChainA, glycoside hydrolase [Phocaeicola vulgatus ATCC 8482],5L7V_B Chain B, glycoside hydrolase [Phocaeicola vulgatus ATCC 8482]
5L7R_A 1.06e-73 527 1018 65 543
ChainA, glycoside hydrolase [Phocaeicola vulgatus ATCC 8482],5L7R_B Chain B, glycoside hydrolase [Phocaeicola vulgatus ATCC 8482],5L7U_A Chain A, Glycoside hydrolase [Phocaeicola vulgatus ATCC 8482],5L7U_B Chain B, Glycoside hydrolase [Phocaeicola vulgatus ATCC 8482]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000393 0.998663 0.000225 0.000237 0.000227 0.000209

TMHMM  Annotations      download full data without filtering help

start end
1289 1311