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CAZyme Information: MGYG000002028_01775

You are here: Home > Sequence: MGYG000002028_01775

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Collinsella sp900755005
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp900755005
CAZyme ID MGYG000002028_01775
CAZy Family GH106
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
866 MGYG000002028_63|CGC1 94351.68 4.6442
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002028 2143924 MAG Spain Europe
Gene Location Start: 1955;  End: 4555  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002028_01775.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 28 859 7.2e-65 0.9635922330097088

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17132 Glyco_hydro_106 1.47e-05 411 632 579 796
alpha-L-rhamnosidase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ATP54541.1 0.0 13 866 4 855
AZH68834.1 0.0 1 861 1 863
QNM10672.1 8.75e-295 1 860 1 833
AGF57028.1 3.30e-234 6 859 5 845
AZS14314.1 5.15e-193 6 859 5 872

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999958 0.000074 0.000005 0.000000 0.000000 0.000001

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002028_01775.