CAZyme Information: MGYG000002038_01561

Basic Information

• Lineage: Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Acutalibacteraceae
• CAZyme ID: MGYG000002038_01561
• CAZy Family: CBM67
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
709		78797.36	4.8351

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002038	2369275	MAG	China	Asia

• Gene Location: Start: 1984; End: 4113 Strand: -

Full Sequence      

MEMQNWNAVWIENTDCPGETAPIFIKEFTVGDVRQAELRICGLGFYVAELNGRRVGDAIL
APAFTAYDKTALYNTYDVADLLRSGSNELRVTLGNGWYNQQEPDAWEFEHAAWRTRPQLI
CELWINGECAVQSDSSWTCGRSRYVYNSLRCGDTYDASAEISGLHPASVSHGPGGVLKLQ
TIAPIRLREVIDPVGIVPSGEPTVYDFGVNLAGNVEITVRGTRGSRVTIQYSERIGADGA
IDRRDISPHVHTERFQEDQYVLSGVGEETWHSAFGYNGFRYARIFVTGEAEILRVQARCF
HTDLADAGSFTIDHPAMNALQQALLRATRTNFHHIPTDCPHREKNGWTGDAHLSCEQALF
NLDMTDAYLKWLDDIVDCQRTNGQVACIVPTSVWGYNWGTGTTWDIVLFEIPYQLYLFTG
DESILERYILPMKQYLNFMRGTADHGIWRNGLGDWCPPKGAQTVSTPALLTAYAYRCVER
YAHCAAILGDTAEAEEAEAWAAQIRADFQQEFIGKEPDSQAYLALLLAFGLTDDPADVLK
RLETQLIADDFHPTSGIFGTKLLYNALTDAGRFDLAWKAATVTGAPGFTDMMTYCSGTLG
ESWTGEWSRNHHMFSSIGDWFYKGIAGIHLDEQAPGFRHIFLRPHVPAGCQAFDARHDTP
LGALRVTWDGKALTVVLPPESTATVEFDGVRTEWAAGVHTLTPAAGRNL

Enzyme Prediction     

No EC number prediction in MGYG000002038_01561.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH78	200	686	5.9e-127	0.9841269841269841
CBM67	10	163	5.4e-21	0.8295454545454546

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam17389	Bac_rhamnosid6H	2.35e-67	305	625	1	340	Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam08531	Bac_rhamnosid_N	6.97e-40	31	189	1	172	Alpha-L-rhamnosidase N-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. This domain is probably involved in substrate recognition.
pfam05592	Bac_rhamnosid	2.34e-21	197	301	3	102	Bacterial alpha-L-rhamnosidase concanavalin-like domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam17390	Bac_rhamnosid_C	8.48e-10	630	685	2	61	Bacterial alpha-L-rhamnosidase C-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QNM09766.1	9.14e-176	6	685	5	684
QGQ94103.1	6.31e-163	1	685	118	838
AVM44981.1	5.03e-152	4	669	27	719
AHF16194.1	5.83e-151	21	689	172	863
AYB33152.1	2.20e-144	19	684	182	873

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6I60_A	1.05e-91	1	668	140	875	Structureof alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12],6I60_B Structure of alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12]
3W5M_A	3.35e-69	33	685	316	992	CrystalStructure of Streptomyces avermitilis alpha-L-rhamnosidase [Streptomyces avermitilis MA-4680 = NBRC 14893],3W5N_A Crystal Structure of Streptomyces avermitilis alpha-L-rhamnosidase complexed with L-rhamnose [Streptomyces avermitilis MA-4680 = NBRC 14893]
6GSZ_A	1.87e-68	5	699	110	861	Crystalstructure of native alfa-L-rhamnosidase from Aspergillus terreus [Aspergillus terreus]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
T2KPL4	7.63e-83	32	678	196	897	Alpha-L-rhamnosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22170 PE=2 SV=1
Q82PP4	1.66e-68	33	685	316	992	Alpha-L-rhamnosidase OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680) OX=227882 GN=SAVERM_828 PE=1 SV=1
T2KNB2	2.68e-64	32	686	186	877	Alpha-L-rhamnosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22090 PE=1 SV=2
P9WF03	1.46e-62	1	678	141	869	Alpha-L-rhamnosidase OS=Alteromonas sp. (strain LOR) OX=1537994 GN=LOR_34 PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000035	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000002038_01561.