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CAZyme Information: MGYG000002063_01545

You are here: Home > Sequence: MGYG000002063_01545

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella;
CAZyme ID MGYG000002063_01545
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
807 86716.13 5.2217
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002063 2224261 MAG China Asia
Gene Location Start: 1730;  End: 4153  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002063_01545.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 481 652 1.3e-40 0.8366336633663366

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 2.15e-50 352 768 8 345
Pectate lyase [Carbohydrate transport and metabolism].
smart00656 Amb_all 1.10e-27 488 650 17 186
Amb_all domain.
pfam00544 Pec_lyase_C 1.36e-15 486 650 33 211
Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QCD40816.1 1.16e-311 228 807 10 589
QCP73706.1 1.16e-311 228 807 10 589
QUT73893.1 1.66e-226 284 806 20 542
QOR18408.1 1.08e-212 271 801 63 583
QUB83317.1 6.29e-212 274 801 28 544

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3VMV_A 9.30e-27 438 650 33 246
Crystalstructure of pectate lyase Bsp165PelA from Bacillus sp. N165 [Bacillus sp. N16-5],3VMW_A Crystal structure of pectate lyase Bsp165PelA from Bacillus sp. N165 in complex with trigalacturonate [Bacillus sp. N16-5]
1AIR_A 6.39e-19 489 766 91 342
ChainA, PECTATE LYASE C [Dickeya chrysanthemi],1O88_A Chain A, Pectate Lyase C [Dickeya chrysanthemi],1O8D_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8E_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8F_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8G_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8H_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8I_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8J_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8K_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8L_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8M_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1PLU_A Chain A, Protein (pectate Lyase C) [Dickeya chrysanthemi],2PEC_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi]
2EWE_A 1.55e-18 489 766 91 342
ChainA, Pectate lyase C [Dickeya chrysanthemi]
1VBL_A 2.25e-17 488 650 133 330
Structureof the thermostable pectate lyase PL 47 [Bacillus sp. TS-47]
3ZSC_A 4.75e-16 490 639 71 225
Catalyticfunction and substrate recognition of the pectate lyase from Thermotoga maritima [Thermotoga maritima]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q8GCB2 4.93e-23 435 658 67 280
Pectate trisaccharide-lyase OS=Bacillus licheniformis OX=1402 GN=pelA PE=1 SV=1
B1B6T1 4.93e-23 435 658 67 280
Pectate trisaccharide-lyase OS=Bacillus sp. OX=1409 GN=pel PE=1 SV=1
Q65DC2 4.93e-23 435 658 67 280
Pectate trisaccharide-lyase OS=Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / CCUG 7422 / NBRC 12200 / NCIMB 9375 / NCTC 10341 / NRRL NRS-1264 / Gibson 46) OX=279010 GN=BLi04129 PE=3 SV=1
Q5AVN4 4.46e-18 488 663 99 277
Pectate lyase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyA PE=1 SV=1
P11073 4.54e-18 489 766 113 364
Pectate lyase C OS=Dickeya chrysanthemi OX=556 GN=pelC PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000476 0.998754 0.000193 0.000224 0.000174 0.000159

TMHMM  Annotations      download full data without filtering help

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