logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000002080_02452

You are here: Home > Sequence: MGYG000002080_02452

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella sp900544825
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp900544825
CAZyme ID MGYG000002080_02452
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
478 MGYG000002080_69|CGC1 53716.6 9.0865
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002080 3221264 MAG Netherlands Europe
Gene Location Start: 11549;  End: 12985  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002080_02452.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 192 446 1.5e-27 0.7569230769230769

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PLN02218 PLN02218 0.001 227 443 206 410
polygalacturonase ADPG

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AII64697.1 2.52e-184 9 478 6 478
QJR65187.1 4.90e-184 25 478 22 477
QJR73783.1 4.90e-184 25 478 22 477
QJR69450.1 4.90e-184 25 478 22 477
QEW35608.1 9.85e-184 25 478 22 477

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.001436 0.970008 0.027776 0.000296 0.000238 0.000228

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002080_02452.