Species | Sutterella seckii_A | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Burkholderiales; Burkholderiaceae; Sutterella; Sutterella seckii_A | |||||||||||
CAZyme ID | MGYG000002101_01556 | |||||||||||
CAZy Family | GT9 | |||||||||||
CAZyme Description | hypothetical protein | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 13510; End: 14568 Strand: + |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
GT9 | 68 | 324 | 6.7e-32 | 0.9377777777777778 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
COG0859 | RfaF | 7.32e-30 | 1 | 352 | 2 | 330 | ADP-heptose:LPS heptosyltransferase [Cell wall/membrane/envelope biogenesis]. |
cd03789 | GT9_LPS_heptosyltransferase | 3.12e-24 | 2 | 350 | 1 | 277 | lipopolysaccharide heptosyltransferase and similar proteins. Lipopolysaccharide heptosyltransferase (2.4.99.B6) is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family also contains lipopolysaccharide 1,2-N-acetylglucosaminetransferase EC 2.4.1.56 and belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
PRK10422 | PRK10422 | 1.85e-17 | 2 | 283 | 7 | 298 | lipopolysaccharide core biosynthesis protein; Provisional |
pfam01075 | Glyco_transf_9 | 1.42e-15 | 63 | 283 | 3 | 219 | Glycosyltransferase family 9 (heptosyltransferase). Members of this family belong to glycosyltransferase family 9. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. All of these enzymes transfer heptose to the lipopolysaccharide core. |
PRK10964 | PRK10964 | 7.07e-05 | 160 | 276 | 170 | 282 | lipopolysaccharide heptosyltransferase RfaC. |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
QDA55162.1 | 1.88e-176 | 1 | 352 | 1 | 354 |
QQS89237.1 | 2.09e-131 | 1 | 348 | 1 | 348 |
BBF22595.1 | 1.27e-95 | 1 | 352 | 28 | 375 |
QEI07449.1 | 1.85e-46 | 2 | 350 | 11 | 371 |
SMB21115.1 | 1.90e-43 | 2 | 352 | 21 | 373 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
P25742 | 1.18e-20 | 8 | 283 | 1 | 286 | Lipopolysaccharide core heptosyltransferase RfaQ OS=Escherichia coli (strain K12) OX=83333 GN=rfaQ PE=3 SV=2 |
Q9R9D5 | 5.40e-20 | 8 | 283 | 1 | 286 | Lipopolysaccharide core heptosyltransferase RfaQ OS=Escherichia coli OX=562 GN=rfaQ PE=1 SV=1 |
P45042 | 1.03e-06 | 1 | 276 | 1 | 290 | ADP-heptose--LPS heptosyltransferase 2 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=rfaF PE=3 SV=1 |
P26469 | 9.33e-06 | 171 | 276 | 182 | 282 | Lipopolysaccharide heptosyltransferase 1 OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=rfaC PE=3 SV=2 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
1.000044 | 0.000006 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |
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