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CAZyme Information: MGYG000002111_00809

You are here: Home > Sequence: MGYG000002111_00809

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Collinsella sp900541015
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp900541015
CAZyme ID MGYG000002111_00809
CAZy Family GH73
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
525 54910.48 6.3218
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002111 2190593 MAG Mongolia Asia
Gene Location Start: 8565;  End: 10142  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002111_00809.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH73 248 398 1e-24 0.9921875

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00877 NLPC_P60 4.71e-25 428 508 1 86
NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.
COG0791 Spr 1.80e-21 411 514 70 182
Cell wall-associated hydrolase, NlpC family [Cell wall/membrane/envelope biogenesis].
COG1705 FlgJ 6.87e-21 247 402 49 188
Flagellum-specific peptidoglycan hydrolase FlgJ [Cell wall/membrane/envelope biogenesis, Cell motility].
NF033741 NlpC_p60_RipA 4.88e-20 423 512 335 440
NlpC/P60 family peptidoglycan endopeptidase RipA.
PRK13914 PRK13914 1.56e-18 411 506 361 460
invasion associated endopeptidase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QIA34838.1 0.0 10 525 1 524
ATP54961.1 1.33e-309 10 525 1 524
AJC12020.1 5.75e-170 97 522 99 525
AWG17013.1 1.87e-168 92 522 94 525
AZR04005.1 1.87e-168 92 522 94 525

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6B8C_A 2.10e-17 413 513 25 130
Crystalstructure of NlpC/p60 domain of peptidoglycan hydrolase SagA [Enterococcus faecium]
2XIV_A 3.21e-17 419 512 83 192
Structureof Rv1477, hypothetical invasion protein of Mycobacterium tuberculosis [Mycobacterium tuberculosis H37Rv]
3PBC_A 3.56e-17 419 512 88 197
ChainA, Invasion Protein [Mycobacterium tuberculosis]
3NE0_A 3.56e-17 419 512 88 197
Structureand functional regulation of RipA, a mycobacterial enzyme essential for daughter cell separation [Mycobacterium tuberculosis H37Rv]
3S0Q_A 5.68e-16 419 512 89 198
ChainA, INVASION PROTEIN [Mycobacterium tuberculosis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A0QX22 2.64e-15 419 512 371 480
Peptidoglycan endopeptidase RipA OS=Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) OX=246196 GN=ripA PE=1 SV=1
O53168 3.21e-15 419 512 346 455
Peptidoglycan endopeptidase RipA OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=ripA PE=1 SV=1
P13692 1.16e-14 413 513 399 504
Protein P54 OS=Enterococcus faecium OX=1352 PE=3 SV=2
P9WHU2 1.14e-13 418 511 275 370
Probable endopeptidase MT2245 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=MT2245 PE=3 SV=1
P9WHU3 1.14e-13 418 511 275 370
Probable endopeptidase Rv2190c OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=Rv2190c PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000029 0.000022 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002111_00809.