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CAZyme Information: MGYG000002119_01172

You are here: Home > Sequence: MGYG000002119_01172

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Neisseria elongata
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Burkholderiales; Neisseriaceae; Neisseria; Neisseria elongata
CAZyme ID MGYG000002119_01172
CAZy Family GT19
CAZyme Description Lipid-A-disaccharide synthase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
384 42647.88 9.6258
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002119 1636053 MAG Mongolia Asia
Gene Location Start: 1816;  End: 2970  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002119_01172.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT19 8 366 6.5e-133 0.9943502824858758

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK00025 lpxB 4.50e-176 8 379 4 373
lipid-A-disaccharide synthase; Reviewed
COG0763 LpxB 1.83e-162 6 383 2 381
Lipid A disaccharide synthetase [Cell wall/membrane/envelope biogenesis].
pfam02684 LpxB 3.11e-118 8 377 1 374
Lipid-A-disaccharide synthetase. This is a family of lipid-A-disaccharide synthetases, EC:2.4.2.128. These enzymes catalyze the reaction: UDP-2,3-bis(3-hydroxytetradecanoyl) glucosamine + 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate <=> UDP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6 -beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate. These enzymes catalyze the fist disaccharide step in the synthesis of lipid-A-disaccharide.
TIGR00215 lpxB 7.45e-117 1 379 1 384
lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]
PRK01021 lpxB 2.53e-48 10 341 231 566
lipid-A-disaccharide synthase; Reviewed

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
SQH49541.1 5.23e-277 1 384 1 384
AJE17699.1 5.23e-277 1 384 1 384
QMT47311.1 1.13e-230 1 382 1 382
ASP17272.1 3.10e-228 1 381 1 381
SNU78998.1 2.41e-211 1 382 1 387

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5W8N_A 1.67e-99 1 381 1 381
LipidA Disaccharide Synthase (LpxB)-6 solubilizing mutations [Escherichia coli BL21(DE3)]
5W8S_A 2.36e-99 1 381 1 381
LipidA Disaccharide Synthase (LpxB)-7 solubilizing mutations [Escherichia coli BL21(DE3)],5W8X_A Lipid A Disaccharide Synthase (LpxB)-7 solubilizing mutations-Bound to UDP [Escherichia coli BL21(DE3)]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q9K1F5 5.26e-202 2 382 3 383
Lipid-A-disaccharide synthase OS=Neisseria meningitidis serogroup B (strain MC58) OX=122586 GN=lpxB PE=3 SV=2
A1KRN0 6.11e-201 1 382 2 383
Lipid-A-disaccharide synthase OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / DSM 15464 / FAM18) OX=272831 GN=lpxB PE=3 SV=1
Q9JX45 9.58e-198 2 382 3 383
Lipid-A-disaccharide synthase OS=Neisseria meningitidis serogroup A / serotype 4A (strain DSM 15465 / Z2491) OX=122587 GN=lpxB PE=3 SV=1
Q5F5Y6 7.96e-196 1 382 8 389
Lipid-A-disaccharide synthase OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) OX=242231 GN=lpxB PE=3 SV=1
Q7NVY1 3.55e-148 8 381 10 383
Lipid-A-disaccharide synthase OS=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) OX=243365 GN=lpxB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000040 0.000007 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002119_01172.