dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: MGYG000002125_01076

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Basic Information help

Species

UMGS1795 sp900555125

Lineage

Bacteria; Firmicutes_A; Clostridia_A; Christensenellales; CAG-552; UMGS1795; UMGS1795 sp900555125

CAZyme ID

MGYG000002125_01076

CAZy Family

GH35

CAZyme Description

hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
668		75665.08	5.3936

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002125	1699850	MAG	Mongolia	Asia

Gene Location

Start: 14776; End: 16782 Strand: +

Full Sequence Download help

Enzyme Prediction help

No EC number prediction in MGYG000002125_01076.

CAZyme Signature Domains help

Family	Start	End	Evalue	family coverage
GH35	9	410	5.2e-47	0.9869706840390879

CDD Domains download full data without filtering help

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam01301	Glyco_hydro_35	1.31e-28	8	410	1	314	Glycosyl hydrolases family 35.
COG1874	GanA	1.43e-23	4	650	3	651	Beta-galactosidase GanA [Carbohydrate transport and metabolism].
pfam02449	Glyco_hydro_42	1.45e-17	22	370	1	335	Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues.
PLN03059	PLN03059	2.23e-10	2	244	30	266	beta-galactosidase; Provisional
cd19918	RsmI_like	1.38e-04	457	511	24	81	uncharacterized subfamily of the tetrapyrrole methylase family similar to Ribosomal RNA small subunit methyltransferase I (RsmI). RsmI, also known as rRNA (cytidine-2'-O-)-methyltransferase, is an S-AdoMet (S-adenosyl-L-methionine or SAM)-dependent methyltransferase responsible for the 2'-O-methylation of cytidine 1402 (C1402) at the P site of bacterial 16S rRNA. Another S-AdoMet-dependent methyltransferase, RsmH (not included in this family), is responsible for N4-methylation at C1402. These methylation reactions may occur at a late step during 30S assembly in the cell. The dimethyl modification is believed to be conserved in bacteria, may play a role in fine-tuning the shape and functions of the P-site to increase the translation fidelity, and has been shown for Staphylococcus aureus, to contribute to virulence in host animals by conferring resistance to oxidative stress.

CAZyme Hits help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AZS13797.1	1.64e-104	2	645	4	687
QHW34707.1	2.39e-93	2	656	19	711
BBI31167.1	1.81e-91	2	648	4	689
AGB40246.1	4.26e-59	7	661	8	702
AZR73760.1	1.78e-47	2	632	6	671

PDB Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
7VKX_A	3.04e-47	6	635	2	676	ChainA, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511],7VKX_B Chain B, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511],7VKY_A Chain A, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511],7VKY_B Chain B, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511],7VL0_A Chain A, Beta-galactosidase [Ignavibacterium album JCM 16511],7VL0_B Chain B, Beta-galactosidase [Ignavibacterium album JCM 16511],7VL1_A Chain A, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511],7VL1_B Chain B, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511],7VL2_A Chain A, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511],7VL2_B Chain B, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511],7VL3_A Chain A, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511],7VL3_B Chain B, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511],7VL4_A Chain A, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511],7VL4_B Chain B, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511],7VL5_A Chain A, Beta-galactosidase [Ignavibacterium album JCM 16511],7VL5_B Chain B, Beta-galactosidase [Ignavibacterium album JCM 16511],7VL6_A Chain A, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511],7VL6_B Chain B, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511],7VL7_A Chain A, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511],7VL7_B Chain B, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511]
7VKW_A	3.45e-47	6	635	7	681	ChainA, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511],7VKW_B Chain B, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511]
7X87_A	8.63e-47	6	635	7	681	ChainA, Beta-galactosidase [Ignavibacterium album],7X87_B Chain B, Beta-galactosidase [Ignavibacterium album]
7VKZ_A	2.93e-46	6	635	7	681	ChainA, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511],7VKZ_B Chain B, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511]
5GSM_A	3.49e-38	2	527	4	561	Glycosidehydrolase B with product [Thermococcus kodakarensis KOD1],5GSM_B Glycoside hydrolase B with product [Thermococcus kodakarensis KOD1]

Swiss-Prot Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q76HN4	1.91e-37	2	527	4	561	Exo-beta-D-glucosaminidase OS=Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) OX=69014 GN=glmA PE=1 SV=1
O58247	8.42e-34	5	513	9	541	Exo-beta-D-glucosaminidase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) OX=70601 GN=glmA PE=1 SV=1
Q8NCI6	7.97e-18	6	166	77	227	Beta-galactosidase-1-like protein 3 OS=Homo sapiens OX=9606 GN=GLB1L3 PE=2 SV=3
A2RSQ1	9.75e-17	6	218	53	256	Beta-galactosidase-1-like protein 3 OS=Mus musculus OX=10090 GN=Glb1l3 PE=1 SV=1
O19015	1.76e-16	2	118	35	150	Beta-galactosidase OS=Felis catus OX=9685 GN=GLB1 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000071	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM Annotations help

There is no transmembrane helices in MGYG000002125_01076.