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CAZyme Information: MGYG000002133_02069
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Prevotella sp000436915 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp000436915 | |||||||||||
| CAZyme ID | MGYG000002133_02069 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 710; End: 2293 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 89 | 432 | 3.4e-50 | 0.9046153846153846 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG5434 | Pgu1 | 7.45e-23 | 53 | 391 | 77 | 448 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| pfam00295 | Glyco_hydro_28 | 1.51e-22 | 166 | 431 | 63 | 307 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| PLN03003 | PLN03003 | 3.78e-17 | 54 | 390 | 19 | 326 | Probable polygalacturonase At3g15720 |
| PLN02188 | PLN02188 | 4.19e-17 | 58 | 432 | 36 | 379 | polygalacturonase/glycoside hydrolase family protein |
| PLN02218 | PLN02218 | 1.57e-16 | 58 | 431 | 67 | 412 | polygalacturonase ADPG |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QNT65232.1 | 1.82e-277 | 1 | 472 | 1 | 474 |
| QEC72689.1 | 2.46e-66 | 46 | 473 | 48 | 446 |
| BAV07348.1 | 1.21e-63 | 45 | 473 | 41 | 439 |
| QEC57624.1 | 2.33e-49 | 48 | 445 | 30 | 411 |
| AYD47266.1 | 5.27e-48 | 48 | 458 | 28 | 423 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1BHE_A | 9.38e-23 | 67 | 439 | 17 | 373 | ChainA, POLYGALACTURONASE [Pectobacterium carotovorum] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P26509 | 6.93e-22 | 67 | 439 | 43 | 399 | Endo-polygalacturonase OS=Pectobacterium parmentieri OX=1905730 GN=pehA PE=1 SV=1 |
| P18192 | 4.14e-21 | 113 | 422 | 83 | 400 | Endo-polygalacturonase OS=Pectobacterium carotovorum subsp. carotovorum OX=555 GN=peh PE=3 SV=1 |
| Q9SFB7 | 8.51e-13 | 58 | 433 | 70 | 434 | Polygalacturonase QRT2 OS=Arabidopsis thaliana OX=3702 GN=QRT2 PE=1 SV=2 |
| O23147 | 3.09e-09 | 55 | 322 | 64 | 324 | Polygalacturonase ADPG1 OS=Arabidopsis thaliana OX=3702 GN=ADPG1 PE=2 SV=1 |
| B8N8M2 | 2.98e-06 | 164 | 354 | 109 | 286 | Probable endopolygalacturonase I OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pgaI PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000356 | 0.998868 | 0.000260 | 0.000162 | 0.000169 | 0.000155 |