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CAZyme Information: MGYG000002142_00566

You are here: Home > Sequence: MGYG000002142_00566

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Collinsella sp900545445
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp900545445
CAZyme ID MGYG000002142_00566
CAZy Family CE8
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
721 MGYG000002142_9|CGC1 79629.64 5.054
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002142 2108482 MAG United States North America
Gene Location Start: 7567;  End: 9732  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002142_00566.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 10 329 4.3e-79 0.9826388888888888
CE19 459 698 6e-26 0.5903614457831325

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4677 PemB 1.28e-63 17 314 93 388
Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism].
pfam01095 Pectinesterase 7.30e-50 16 311 10 275
Pectinesterase.
PLN02773 PLN02773 2.15e-41 2 314 1 282
pectinesterase
PLN02432 PLN02432 4.91e-41 22 334 24 291
putative pectinesterase
PLN02708 PLN02708 6.45e-41 26 336 258 550
Probable pectinesterase/pectinesterase inhibitor

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QIA34433.1 0.0 2 719 1 719
ATP54718.1 0.0 1 721 1 721
QUC03567.1 0.0 2 712 1 706
QRP39805.1 4.61e-101 10 336 20 349
ASN95501.1 4.61e-101 10 336 20 349

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1XG2_A 5.83e-28 10 331 7 301
ChainA, Pectinesterase 1 [Solanum lycopersicum]
3UW0_A 3.38e-27 18 256 44 269
Pectinmethylesterase from Yersinia enterocolitica [Yersinia enterocolitica subsp. enterocolitica 8081]
5C1E_A 2.85e-26 16 334 17 291
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
5C1C_A 5.23e-26 16 334 17 291
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
1GQ8_A 7.83e-23 10 331 11 305
Pectinmethylesterase from Carrot [Daucus carota]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q8GXA1 9.97e-35 10 337 260 559
Probable pectinesterase/pectinesterase inhibitor 23 OS=Arabidopsis thaliana OX=3702 GN=PME23 PE=2 SV=3
Q9LVQ0 3.98e-32 2 314 1 282
Pectinesterase 31 OS=Arabidopsis thaliana OX=3702 GN=PME31 PE=1 SV=1
O81320 1.83e-31 10 328 167 453
Putative pectinesterase/pectinesterase inhibitor 38 OS=Arabidopsis thaliana OX=3702 GN=PME38 PE=3 SV=1
O04887 1.68e-30 10 310 205 472
Pectinesterase 2 OS=Citrus sinensis OX=2711 GN=PECS-2.1 PE=2 SV=1
Q8L7Q7 2.14e-30 26 314 306 578
Probable pectinesterase/pectinesterase inhibitor 64 OS=Arabidopsis thaliana OX=3702 GN=PME64 PE=2 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000035 0.000001 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002142_00566.