logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000002150_00148

You are here: Home > Sequence: MGYG000002150_00148

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Mediterraneibacter;
CAZyme ID MGYG000002150_00148
CAZy Family GH106
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
743 85951.47 4.6558
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002150 1960881 MAG Germany Europe
Gene Location Start: 2697;  End: 4928  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002150_00148.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 210 740 1.8e-51 0.6104368932038835

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17132 Glyco_hydro_106 3.21e-13 207 713 396 867
alpha-L-rhamnosidase.
cd03143 A4_beta-galactosidase_middle_domain 0.002 467 634 1 133
A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. This group includes proteins similar to beta-galactosidase from Thermus thermophilus. Beta-Galactosidase hydrolyzes the beta-1,4-D-galactosidic linkage of lactose, as well as those of related chromogens, o-nitrophenyl-beta-D-galactopyranoside (ONP-Gal) and 5-bromo-4-chloro-3-indolyl-beta-D-galactoside (X-gal). This A4 beta-galactosidase middle domain lacks the catalytic triad of typical GATase1 domains. The reactive Cys residue found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow in typical GATase1 domains is not conserved in this group.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BBF43858.1 6.18e-209 1 742 5 746
BCJ99162.1 5.82e-146 10 743 8 725
AEE96951.1 4.51e-76 21 741 39 753
AEE95392.1 1.86e-59 16 602 14 561
AEE96868.1 2.72e-59 6 597 3 543

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000053 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002150_00148.